Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc264g00010 ATGGCTTCCGCAGCCTCTCCAAGAATACCCACCGAGACGGTGAACAGCGCCGTGCAGGCTCTCCTGAAATGGCGAGACTCCACTTCCGAGTCTCACAAACCCAAACTCTTCGACGCCGACGAAGAATTCCTCTACTTAGTCCTCACTCTCAAAGCTATTCCTCATAAATCCCGCGTTAACCCTTACAAGATCCCTTTACCTCACACTCTCCTCTCTCCCTTCTCCGAAACCTGCCTCATCATCGACGATAGGTCAAAATCCAAACTCACTAAGCAAGAAGCACAGAAGAAGATCAAAGCCGAAAACATTGGCGTTTCCAAGGTTCTCAGGTTGTCCAAGCTTGCCTCCGATTATCGCCCTTTCGAGGCGAAGCGGAAGCTCTGCGATTCGTATGATGTGTTCTTCGCTGATAAGAGAGTGGTGCCTTTGTTGCCCAGGCTGTTAGGGAAGAAATTCTTTAGGAAGAAGAAGATTCCGGTTCAGGTGGATTTGACTAAGAAGAATTGGAAGGAGCAGGTGGATAGGGCGTGTTCGTCTGCGCTGCTGTTTATTGGAACGGGGACTTGCTGTGTTGTGAAGGTTGCCAAGGTTTCCATGGAGAGGGAGGAGATTGTTGAGAATGTGATTGCTGCTATTGAGGGGGTTGTCGAGGTTGTGCCGAAGAAGTGGGCCAACGTGAGGTCCTTGCACGTTAAGCTTTATGAGTCGCTGGCGCTGCCGGTTTATCAGGCTGTTCCGGAGGTGAAGTTGAGGATTGAGGGAAGTAAGGCTGAGGAGTTGGAGAAAGAGAAGCAGAAGAAGAAGGAAGACGCGGAGGAAGAGGGCGAAGATGTTAGCGGCGCAAAGGTGGTAAAGAAGAAGAAGGGGAGAATTCATGAAGTTAGATACATGGATAGCGAAGTTGGCGAGGATAATGTTGAAGATGTGGCAGGTAGTGAGGATGATGGTGGTGTTGTTATTGAGCAAGATTCGGATAATGCTGAAGAAGGTAGTGGAGAATTGGTGAATAAGAAGAGGAAGAAAGGTGGGAAAGCAACTAAAGGGGCGTTGAGCTGTGTCAAAGAATTGAAGAAATCTGTTAAGAAAATTGGTAAAGAGAAGAAATCTTCGAAAGTGATGAAGGAAAATTCCGTCAAGAAGAGTCATAATAATGAATTATCTGTTGAGGATGCAGATTCAGGAAAGAAGAAGATCAAGAAGAAACTTTCGCCATTGAATTCAGAAGAAGCTGATTTGAAAAAGAAAGCGAGGGCTAAGAAAAAGTGA 1266 0.4668 MASAASPRIPTETVNSAVQALLKWRDSTSESHKPKLFDADEEFLYLVLTLKAIPHKSRVNPYKIPLPHTLLSPFSETCLIIDDRSKSKLTKQEAQKKIKAENIGVSKVLRLSKLASDYRPFEAKRKLCDSYDVFFADKRVVPLLPRLLGKKFFRKKKIPVQVDLTKKNWKEQVDRACSSALLFIGTGTCCVVKVAKVSMEREEIVENVIAAIEGVVEVVPKKWANVRSLHVKLYESLALPVYQAVPEVKLRIEGSKAEELEKEKQKKKEDAEEEGEDVSGAKVVKKKKGRIHEVRYMDSEVGEDNVEDVAGSEDDGGVVIEQDSDNAEEGSGELVNKKRKKGGKATKGALSCVKELKKSVKKIGKEKKSSKVMKENSVKKSHNNELSVEDADSGKKKIKKKLSPLNSEEADLKKKARAKKK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc264g00010 421 CDD Ribosomal_L1 14 241 IPR028364 -
Stsc264g00010 421 MobiDBLite consensus disorder prediction 363 421 - -
Stsc264g00010 421 MobiDBLite consensus disorder prediction 259 281 - -
Stsc264g00010 421 SUPERFAMILY Ribosomal protein L1 11 242 IPR023674 -
Stsc264g00010 421 FunFam Ribosomal protein L1p/L10e family 87 178 - -
Stsc264g00010 421 Gene3D - 182 238 - -
Stsc264g00010 421 Coils Coil 250 277 - -
Stsc264g00010 421 MobiDBLite consensus disorder prediction 363 415 - -
Stsc264g00010 421 MobiDBLite consensus disorder prediction 295 348 - -
Stsc264g00010 421 Coils Coil 405 421 - -
Stsc264g00010 421 Gene3D - 87 179 IPR016095 -
Stsc264g00010 421 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 17 236 - -
Stsc264g00010 421 Pfam Ribosomal protein L1p/L10e family 34 236 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc264g00010 Stsc-Chr264 43938 45884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc264g00010 130 232 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 29.126 3.81e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc264g00010 K14775 - ahf:112697689 555.829