Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc260g00005 ATGCCAAACCTAAGGTTACTTCCTTTTGCTAGCAACATTCGTTATGGGGAAAAGAGGGTTGATTATACTCTGAGTCTTCCAACAAATTTGGAGTTGCGTAATAACTTGAGGTATATTCAATGGGATGGTTGTCCATTAAAATCTCTATCAAACACTTCTTGGCCTAGCAAGCTTGTTGAACTCTCCATGCCATATAGTAATGCTGAGAAGCTTTGGGATGAACCACAGCGGTTACTTCTCGTGATTCGTCATTTACATCATTTCTCATTTCTGATTTTGCTAGCTCTTCTTTGTTTTCTCTCTGTCTCTTCAACTCACTTTCACACAACTTCACACTCAGATCATGAGTTTGAACATGGTGCGATGAGCGTGGAGAGTGTGGAGATTGAGAACTCAAGAGCTTCATCTATAGCAAGAATCGTGAGAATTGACTCACTTGTGCGAAAGCTCATCAACGGAAGCTAG 465 0.4086 MPNLRLLPFASNIRYGEKRVDYTLSLPTNLELRNNLRYIQWDGCPLKSLSNTSWPSKLVELSMPYSNAEKLWDEPQRLLLVIRHLHHFSFLILLALLCFLSVSSTHFHTTSHSDHEFEHGAMSVESVEIENSRASSIARIVRIDSLVRKLINGS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc260g00005 154 Pfam Leucine Rich Repeat 57 74 IPR011713 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc260g00005 Stsc-Chr260 45416 46129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc260g00005 1 72 WRKY Transcription Factor Family AT4G12020 42.466 4.87e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc260g00005 - - adu:107464298 136.732