Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc259g00002 ATGGACCTCCATATCTTGCTCTTACTTATCACACTCTCTCTATTCCCCACCATCATCCTCCGCTCCATCCTCAATCGCCGCCGACAAGCCAATCGCCCACCCGGTCCACCCGGCATACCTATCATCGGAAACCTCCACCAACTCGGCCCAAAACCCCACGCAACTCTCTCCACTCTTTCCAAAACCTACGGCCCCCTCATGTCCCTCCAACTCGGCTCCGTCACTGTCGTCATCGCCTCCTCCCCCTCCGCCGCCCAAGAAATCCTCCAGAAGCACGATAACTCCTTCTCTGACCGCCCAATCCCAGACGTCATTACCGCACAGCCTAACGTCCTTGACACCCTGGCCTGGTCCCCCGGAGGCCCAAGGTGGCGCAGCCGGCGCCGTCTATGCACCACCAAGATCTTCACCGCTCAGCGCCTAGATCTTCTCCAGCACCTCCGGCAACACAAGGTGCAGCAGCTCGTGCAACACCTTCACCAGAAATCCACCGCAAGAACACCGGTGAACATCGGAGAGGTGGCTTTCGCCACGATGCTGAACCTTGTGTCGAACACGGTGTTCTCGGAGGACGTGGTAGATCCGGAGTTCAAGAGCGCGGGGGAGTTCAAGGAGGTGGTGTGGCGGATCATGGAGAACGCCGGGAGGGTGAACGTGTCGGATTATTTTCCGGCGGTGAAGTGGTTGGACTTGCAGGGTGTGAAACGGCACGTAACAGTGTCTTATTTGAGAATCCATAAACTGTTTGATGAAATGATTGGGAAGCGCGTGAGGGACAGAGACACGTGCGGGGCGCGTGGTGATGACTTCTTGGATGTGTTGCTTGATCATTGCGAGCAGCAAGAACGTGATACTAATAACGACGATTCTGAATCTCTCACTATTGACAACATCAAGCCTATGCTTTTGGATTTGTTTATTGCTGGAAGTGACACTTCAGGATCAACAATAGAATGGGCAATGGCAGAGCTTCTACACAACCCAGAAATCATGCATAAAGCAAGAAACGAACTCAACCTAGTAATTGGAACCACCAACAATCAAGTCAAGGAATCAGACATCCCTAGACTTGAATACATGGAAGCCATAGTCAAAGAAACCTTAAGGCTCCATCCATCAGTGCCTCTTCTCTTGCCTTATCTCGCTGGAAACAATGTCCAAGTAAACGGTTACACCATTCACAAGGGAGACCAAGTTCTCATCAATGCATGGTCTATAGGAAGAGACCCTCAATACTGGGATGATCCTTTGGCTTTTCGACCTGAGAGATTTCTCGGGTCGAAAATAGATTTCAAAGGGAGGAATTTTGAGTACTTGCCATTTGGTGCTGGAAGAAGGATCTGCCCTGGATTGCCCCTTGCTAACAGAATGATTACTTTGGTGGTGGCTGCTTTGGTGCATTCATTTGAATGGAAACTTCCAGAAGGTGTCACCCCTGAAAGCCTTGACATGACTGAGCAGTATGGAATAACTTTGAAGAGACTTACTCCTCTCTGTGCCATTCCAATTTCAGTATAA 1518 0.5066 MDLHILLLLITLSLFPTIILRSILNRRRQANRPPGPPGIPIIGNLHQLGPKPHATLSTLSKTYGPLMSLQLGSVTVVIASSPSAAQEILQKHDNSFSDRPIPDVITAQPNVLDTLAWSPGGPRWRSRRRLCTTKIFTAQRLDLLQHLRQHKVQQLVQHLHQKSTARTPVNIGEVAFATMLNLVSNTVFSEDVVDPEFKSAGEFKEVVWRIMENAGRVNVSDYFPAVKWLDLQGVKRHVTVSYLRIHKLFDEMIGKRVRDRDTCGARGDDFLDVLLDHCEQQERDTNNDDSESLTIDNIKPMLLDLFIAGSDTSGSTIEWAMAELLHNPEIMHKARNELNLVIGTTNNQVKESDIPRLEYMEAIVKETLRLHPSVPLLLPYLAGNNVQVNGYTIHKGDQVLINAWSIGRDPQYWDDPLAFRPERFLGSKIDFKGRNFEYLPFGAGRRICPGLPLANRMITLVVAALVHSFEWKLPEGVTPESLDMTEQYGITLKRLTPLCAIPISV 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc259g00002 505 Gene3D Cytochrome P450 20 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 CDD CYP76-like 60 502 - -
Stsc259g00002 505 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 Pfam Cytochrome P450 33 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc259g00002 505 FunFam Cytochrome P450 76C4 24 501 - -
Stsc259g00002 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Stsc259g00002 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 504 - -
Stsc259g00002 505 SUPERFAMILY Cytochrome P450 26 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc259g00002 Stsc-Chr259 1001 18971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc259g00002 3 503 Cytochrome P450 AT2G45550 43.478 2.67e-149 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc259g00002 - - aip:107619366 764.992