Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc256g00007 ATGCCAGATGTTCAGGCCCTTGTTAATGATTTTGTCAATCAACTTAAAAAACGTAAAATTGAAGGGTCTCAGGCCACAGCAAAGCAGACGGCCGAGTTGCTTCGTTCTGTGATTTCGCAGCAGCGGGTGCCACACACGAACCAGGCTGCTGCTTTGATTAATGCAGTAAGGGCAGTTGGGGAGCAGCTTATTGCTGCAAATCCTGTTGAGCTAGCAGTGGGAAATATTGTAAGACGTACTTTACACATTATAAGGGAGGAGGATCTTTCCCTTGCTACAGCTGCTATGGCTGGTTTGGGGCTGTCAGTTGCTAGTGATGATGAAGATGACATGGAGCGAAGTGACCATCCCGTTTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGCCCACCATCCTTGCAAACTCTTCTAGAGGATATGCCTGATTCAGCTGCTGTTCCACACACGTCTTCCTCCGGGGGTGATTCTGAAGGGAAAAGCAGATCAGTTGACAAAGGTTCAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTTAATGAACTTATTCAAGACATATCCACTTGCTATGAACAAATAGCTGAGCAAGCAGTAGAGCACATTCATCAAAACGAGGTAATATTGACACTAGGCAGTTCAAAAACAGTGTTGGAATTTCTTTGTGCTGCAAAGGATAAAAAGAGATCATTTAAGGTCTTTGTTGCTGAGGGAGCACCAAGATATCAAGGACATCTCCTTGCAAAAGATTTGGCTGCTAGAGGCTTACAAACCACAGTAATTACTGATTCTGCAGTTTTTGCCATGATTTCCCGAGTTAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGTGGAGTGATTGCCCCGGTTGGGTTAAATATGGTTGCACTTGCAGCTCAGAGGCATGCCGTTCCATTTGTCATACTTGCTGGGAGCCACAAGTTGTGCCCTTTGTATCCGCACAATCCTGAAGTCCTACTGAATGAGCTGAGATCCCCATCTGAGCTACTTGACTTTGGGGAATTCTCGGATTGCATGGATTCTGCTAGTGGCGCTGGCTCTCTTCACATTGTTAATCCAACATTTGATTATGTGCCACCTAAACTCGTTAGTTTGTTTATCACTGACACTGGAGGACATAACCCATCCTATATGTACCGGCTCATAGCGGATTACTACTCAGCTGATGATCTGGTGGTGAAAGGAAGGCCTACTACAGGGAGTTGA 1248 0.4567 MPDVQALVNDFVNQLKKRKIEGSQATAKQTAELLRSVISQQRVPHTNQAAALINAVRAVGEQLIAANPVELAVGNIVRRTLHIIREEDLSLATAAMAGLGLSVASDDEDDMERSDHPVLSAAAVAAAARSTLRPPSLQTLLEDMPDSAAVPHTSSSGGDSEGKSRSVDKGSRGRKLKHDVIEAVNELIQDISTCYEQIAEQAVEHIHQNEVILTLGSSKTVLEFLCAAKDKKRSFKVFVAEGAPRYQGHLLAKDLAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVILAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDSASGAGSLHIVNPTFDYVPPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKGRPTTGS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc256g00007 415 Gene3D - 194 399 IPR042529 -
Stsc256g00007 415 MobiDBLite consensus disorder prediction 147 174 - -
Stsc256g00007 415 FunFam translation initiation factor eIF-2B subunit beta 194 400 - -
Stsc256g00007 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 7 404 IPR037171 -
Stsc256g00007 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 406 - -
Stsc256g00007 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc256g00007 Stsc-Chr256 22802 28752 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc256g00007 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 82.641 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc256g00007 K03754 - gmx:100778545 750.355