Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc254572g00001 GTTGCGTTGGCACACACAATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAGAGTTGCTATTTCATTCACTCACATAATCAAGAGCGCTGAGCCTGCTTTCAGTGTCCTTCTCTCAAGGCTTTTCCTCCGACAGCCATTCCCTTTGCTCGTTTACCTCTCATCGCTGCCAATCATAGGTGGTTGCGCACTCGCCGCCTCGCCGCCGTAA 210 0.5238 VALAHTIGHVAATVSMSRVAISFTHIIKSAEPAFSVLLSRLFLRQPFPLLVYLSSLPIIGGCALAASPP 69
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc254572g00001 69 Pfam Triose-phosphate Transporter family 1 66 IPR004853 -
Stsc254572g00001 69 SUPERFAMILY Multidrug resistance efflux transporter EmrE 2 67 - -
Stsc254572g00001 69 PANTHER SOLUTE CARRIER FAMILY 35 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc254572g00001 Stsc-Chr254572 53 262 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc254572g00001 1 66 Antiporters AT1G61800 81.818 6.89e-31 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc254572g00001 K15283 - thj:104809513 109.383