Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc253g00003 ATGGTGGTTCCTCCTTCTCCATACTGTTTTCAGATTCTTATGCTTCTTTCTCTTATATTTTTCTTGTATATAGCATCTCATCATCAGATTCAAGCTGCTGCTGCTTCAAAAGTTGAATACCTCCCTGGTTTTGATGGTCCACTTCCCTTTCAACTTGAAACTGGATATGTGGGGTTGGGGGACACAAATGATGACTTGCAAGTTTTCTATTATTTTATTAAGTCAGAAAATGATCCTGTGAATGATCCTCTTATGCTATGGCTAAGTGGTGGTCCTGGTTGTTCTTCATTCTGTGCCCTTGCCTTTCAAATTGCCACCCAAACACCATCCTCAACCATCCTCTCATCTCTCTGTTCCCCCTTCTATGACCTCTCACTGCCGTGGCGTCGCCCAGTCCATCCTCAGCCACCATCGTCACTCACTTTCAACCCCTCTTTCTTCAACTGCGTCACACACCCACCCCTCCTCCCTCACACTCACGGCCTCACACGCAAAACCGCTGCCCCCTCCACCACCACCAACATCACGATCTTAACCTCATCGCAAGCCACCACCACTCGCCCTCAGTCTCACTTTCCCCTCTGCGTCCACGAGAGTCGTTGTCTTCTCAAGCTGATCCTTCGTTCCAACAAGCTCTTCTTCCCTTGTATATATACCCTCTCCCTGTAG 669 0.4798 MVVPPSPYCFQILMLLSLIFFLYIASHHQIQAAAASKVEYLPGFDGPLPFQLETGYVGLGDTNDDLQVFYYFIKSENDPVNDPLMLWLSGGPGCSSFCALAFQIATQTPSSTILSSLCSPFYDLSLPWRRPVHPQPPSSLTFNPSFFNCVTHPPLLPHTHGLTRKTAAPSTTTNITILTSSQATTTRPQSHFPLCVHESRCLLKLILRSNKLFFPCIYTLSL 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc253g00003 222 SUPERFAMILY alpha/beta-Hydrolases 38 102 IPR029058 -
Stsc253g00003 222 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 36 121 IPR001563 GO:0004185|GO:0006508
Stsc253g00003 222 Pfam Serine carboxypeptidase 42 102 IPR001563 GO:0004185|GO:0006508
Stsc253g00003 222 Gene3D alpha/beta hydrolase 30 118 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc253g00003 Stsc-Chr253 14246 16634 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc253g00003 27 65 Calmodulin-binding Proteins AT2G22960 53.659 2.28e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc253g00003 K16296 - tpra:123922058 148.673