Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc253g00002 ATGAATCACCCGGAATTTATTTCAAATAAATTTTACATGGGAGCTGATTCATACTCTGGTATTTCTGCCCCCGGTATTGTTCAAGAAATTTCAAATGGAAATGATCAAGGTCTTCAACCCCCGATAAATCTTCAGGGATATATACTAGGAAACCCAATTACAACAGGAAAAGAGTCAAATGATAAGATCCCATATGCTCATGGAATGGGACTTATTTCTGATGAACTCTATTTGTCACTACAGAGAAACTGTAAAGGGGAGTATATCGATATAAATTCCAAAAATGAAGTGTGTTTAAAAGACATGCAATATTTTAATGAGTGCCTTTTGGGTATTAACGAGTGGTACATTTTGGGTGGTGATTGCGACGAAGATGATTTTCTTATGGGTGATCAAGGGACACCCAAGAGATTTTTGACTCAGAAATTGAAGGTTCCTCTTAGTTCTTCTCTAACAGTGACACCACCAGCAACCTGCCAAGTTGTTTATCGTTATTTCCTTGGCACCCAATGGGCTAATGCTGACAGTGTTCGCAAGGCACTCCATGTTAGAGAGGGCATAGGAAAATGGAAACGGTGTTACTCTACTGATTTTGACTTTGACATAGCTACCAGTTTTGAATTCCATGTAAATTTTAGTGCAAAAGGCTACCGTTCCTTGATATTTAGCGGCGATCACGACTTAGTCGTTCCTTTCTCGTCAACGCAGGCGTGGATAAGGGCTCTGAACTACTCCATTGTAGATGATTGGAGGCCATGGCTTTTGAATGGCCAAGTTGCAGGATATACAAGGACTTACTCAAATCAAATGACATTTGCAACCATAAAGGGTGCAGGGCATACAGCTACTGAGTACAAGCCAGATGAAGGTTTAGCCATGTTCTCTAGGTGGCTCTCTAATGTCCCTTTATGA 912 0.4046 MNHPEFISNKFYMGADSYSGISAPGIVQEISNGNDQGLQPPINLQGYILGNPITTGKESNDKIPYAHGMGLISDELYLSLQRNCKGEYIDINSKNEVCLKDMQYFNECLLGINEWYILGGDCDEDDFLMGDQGTPKRFLTQKLKVPLSSSLTVTPPATCQVVYRYFLGTQWANADSVRKALHVREGIGKWKRCYSTDFDFDIATSFEFHVNFSAKGYRSLIFSGDHDLVVPFSSTQAWIRALNYSIVDDWRPWLLNGQVAGYTRTYSNQMTFATIKGAGHTATEYKPDEGLAMFSRWLSNVPL 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc253g00002 303 Pfam Serine carboxypeptidase 2 300 IPR001563 GO:0004185|GO:0006508
Stsc253g00002 303 Gene3D alpha/beta hydrolase 1 302 IPR029058 -
Stsc253g00002 303 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 287 IPR001563 GO:0004185|GO:0006508
Stsc253g00002 303 SUPERFAMILY alpha/beta-Hydrolases 3 302 IPR029058 -
Stsc253g00002 303 FunFam Carboxypeptidase 206 300 - -
Stsc253g00002 303 FunFam Carboxypeptidase 158 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc253g00002 Stsc-Chr253 3428 10546 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc253g00002 167 303 Calmodulin-binding Proteins AT2G22960 60.432 1.44e-56 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc253g00002 K16296 - gmx:100780069 437.958