Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc251g00003 ATGCTTGCTCAATTGGACATGACAATGGAAAATCCTACTCAGCTCATTTGTTGCGGCCAAGAAATTGGTTGCCGGAGATTCATTTGTTTTTCTAAGGGGAGAGAATGGACAACTGAGAGTAGGCGTTTGGCATCTGAATCCGCTGCAGAGTCCTACATCTTCATCCGTGGTGTCGACACTAAACATGCGACTTGGAGTGATTGTCACTGCAAGCCATTCTGTTATGACCAACACCATCTTTGTGGACTAGTCAGTTCATTGTCGTTTTGTGGTACAATCGTTGGAGTTGGTGATGAATCTCGAGAATGGCCGGATTCTCAATGGCGATCGTTGAAGGTTCAATGGGATGAACCAGCAACAATGCAAAGACTAGATAGACTTTCATGTTGGGAGATTGAACCTCTCATTACGCCTTTGAATTCGGTTCAACCAACCGCGAAGGGAAAAAGATCAAGGCATTCTGAGGCTTCATCTTCTGGTAGCAAAGAAAGCCAAGTACTAAGAAAGAGCTTAATGGAGAAATCAGAGAAAAAAGATTCCACCTTTAGTCTGAAAAAAACCATATGTGGCTGGTGA 576 0.4358 MLAQLDMTMENPTQLICCGQEIGCRRFICFSKGREWTTESRRLASESAAESYIFIRGVDTKHATWSDCHCKPFCYDQHHLCGLVSSLSFCGTIVGVGDESREWPDSQWRSLKVQWDEPATMQRLDRLSCWEIEPLITPLNSVQPTAKGKRSRHSEASSSGSKESQVLRKSLMEKSEKKDSTFSLKKTICGW 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc251g00003 191 Gene3D - 75 139 - -
Stsc251g00003 191 MobiDBLite consensus disorder prediction 141 183 - -
Stsc251g00003 191 MobiDBLite consensus disorder prediction 167 183 - -
Stsc251g00003 191 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 87 169 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc251g00003 Stsc-Chr251 15091 17364 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc251g00003 89 157 B3 DNA Binding Superfamily AT3G61830 57.534 1.04e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc251g00003 K14486 - gmx:100795763 97.4413