Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc24g00019 | ATGGCTCCAAAGAGTAATGAAAAGGCAACTAAGAAATCAGTGATGATGAATAGAGGAGCATGGACCCCTGAAGAGGATGATAAGCTAGCTCACTTCATTCAAATTCATGGTGCAAAGAGATGGAAGACTGTTGCAATCAAATCAGGTCTAAAAAGATGTGGGAAAAGTTGCAGGCTGAGATGGTTAAACTATCTTAGACCCAATATCAAGAGGGGAAACATCACAATTGAAGAAGAAGACTTGATTCTTAGGCTTCACAAACTTCTAGGAAACAGGTGGTCTCTGATAGCTGGGAGGCTTCCGGGACGAACAGACAATGAAATCAAGAACTATTGGAATTCTCATTTGTGCAAAAAAGTCATGAATCAGAATGCAGAAGAGAAACCATCAACTTCATCAACAAAAGAAAGTGGTGTCACACTCAATAATAAACATGATAATGTAGAGGACGGTGAAGAAATAATGTTGGAAGAACAAAATAAAGGAGCCTCCAATAATAATGGGAGTGATGATAATTTAGATATTAGCTTCGATGTGGACGAATTTTTTGACTTCTCTACTACTGAGGAATCCTTTGGTTTTGATTGGATAAACAAGTACCTTGATTTTGATGAGAATCATGAGAGTACAAAAGAAAAAAAAATGACATGA | 651 | 0.3717 | MAPKSNEKATKKSVMMNRGAWTPEEDDKLAHFIQIHGAKRWKTVAIKSGLKRCGKSCRLRWLNYLRPNIKRGNITIEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVMNQNAEEKPSTSSTKESGVTLNNKHDNVEDGEEIMLEEQNKGASNNNGSDDNLDISFDVDEFFDFSTTEESFGFDWINKYLDFDENHESTKEKKMT | 216 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc24g00019 | 216 | MobiDBLite | consensus disorder prediction | 123 | 145 | - | - | |
Stsc24g00019 | 216 | PANTHER | TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 | 10 | 160 | - | - | |
Stsc24g00019 | 216 | ProSiteProfiles | Myb-like domain profile. | 13 | 65 | IPR001005 | - | |
Stsc24g00019 | 216 | CDD | SANT | 20 | 65 | IPR001005 | - | |
Stsc24g00019 | 216 | Gene3D | - | 74 | 147 | - | - | |
Stsc24g00019 | 216 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 17 | 65 | IPR017930 | - | |
Stsc24g00019 | 216 | CDD | SANT | 77 | 116 | IPR001005 | - | |
Stsc24g00019 | 216 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 66 | 120 | IPR017930 | - | |
Stsc24g00019 | 216 | MobiDBLite | consensus disorder prediction | 123 | 141 | - | - | |
Stsc24g00019 | 216 | SUPERFAMILY | Homeodomain-like | 17 | 112 | IPR009057 | - | |
Stsc24g00019 | 216 | ProSiteProfiles | Myb-like domain profile. | 66 | 116 | IPR001005 | - | |
Stsc24g00019 | 216 | FunFam | MYB-related transcription factor | 17 | 70 | - | - | |
Stsc24g00019 | 216 | Pfam | Myb-like DNA-binding domain | 71 | 116 | IPR001005 | - | |
Stsc24g00019 | 216 | Pfam | Myb-like DNA-binding domain | 18 | 65 | IPR001005 | - | |
Stsc24g00019 | 216 | Gene3D | - | 10 | 71 | - | - | |
Stsc24g00019 | 216 | SMART | sant | 70 | 118 | IPR001005 | - | |
Stsc24g00019 | 216 | SMART | sant | 17 | 67 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc24g00019 | Stsc-Chr24 | 187195 | 188873 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc24g00019 | 16 | 203 | MYB Transcription Factor Family | AT3G13540 | 49.485 | 1.90e-56 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Stsc24g00019 | Myb_DNA-binding | 3.8e-16 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc24g00019 | K09422 | - | gmx:100799575 | 245.743 |