Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc248g00006 ATGGGAGTAACTATCCATTCTTCTTACACCATAACCCCCTCAAATTCCTCTCCAACTACAACAACAATCCCTTTGTCACACTGTCAACAAACCAAGCTTCCAAACCATGGATCCCAACTTTACCTCTACACCTCTTCTAACGCTCCTCCTTCAATTCAAAATCTCAGATTCTCACTCACCAAAGCCTTGAATCTCTATTACCCCTTAGCAGGAAGACTCACATGGATCCATGGCGGTCGATTGCACCTTCTCTGCAACTCAAAGGGCGTCAAACTATCGGAAGCCACGTGTCACGACCATCACACAACCGTCGATGAGCTTCTCCGGAACCTCGATAACAGTGCTTTGGTGGAGCAGTTTTTGCCCAAGGTTGACTACAGCGTTGACCGGATCGAGGAGATGCCGCTGATGGCGGCACAGATCACGAGGCTGCCGTGCGACGGCGTCGTTTTGGGAGTGGCTATTTGTCGCGTTGTGGTTGACGGAGCGAGTCTTGGGAATTTCATGAGTGCGTGGTCGAAATTGGCGAGAGGTGAAGATCTGGATTCGAGTTTGTTGGTTCCGGTTCATGATCGAGGTTTGTTGGATTCGCTTGGTGTAGGTGTGGGTTCAAGATTTGAACATACTGAATTTCTAACACCGCCACTTTGGAGTGAAGATGAAGAAGAAGAAGAACAACGGCGAACACGTGGGAGCTATGAGCTTGGTAGTGTTGTTTTGAAACTCAGCAAAGGCCAAGTTGAGATACTCAAGAACAAAGCTCATCATCATGATGGTAAAGATGTCTTTGGCAATGGTTTAAACTCATCATCAGCACTTTCTTCAAGTAGGCCTTATACTAGTTTTGAGGTCATAAGTGGTCACTTATGGAGATGTGTTTGCAAGGTGAAGAATGAGGGTAATTGGAGCCAGAAAACAAGGGTAACTGCATTGGTGAATTGCAGGAACAGAGTTAAACCAAATCTTCCTCAAAGCTACTTTGGGAATGCAACGTTTCCTACCGTGACACCGACTTGTAGCTTCGATGATATTGTTCACAAGCCTCTAGTCTATGCCGTTTCGAATGTGAGGAAGGCGATCGAGCGAATGAATGATGAGTATGTAAGGTCTGCCATTGATTACATTGCTAATCAGAAGGACATGAATTCATTGAGGGAAAAACTGTATAATCCTGGAGGAGGAAAATCCAGGGTGAATTCGAATTTGTATATTGTGAGTTGGGCTAACTTTCCTTTTTATGAAGTGGATTTCGGGTGGGGAAAGCCGGTTTGTTTGGTTCCGGGAAGCATAAATTCGGACGGGAAGGCCTTTGTTATGAACAATGGAAGTGGTGATGACTTCATCGTAGCTATTTGCTTGCAAAAATCCCATGTGGATGATCTGAAGAAACTCTTTTATGATGGTATAGAGGAGGTATATCCTAATTCCAAATTGTGA 1437 0.4489 MGVTIHSSYTITPSNSSPTTTTIPLSHCQQTKLPNHGSQLYLYTSSNAPPSIQNLRFSLTKALNLYYPLAGRLTWIHGGRLHLLCNSKGVKLSEATCHDHHTTVDELLRNLDNSALVEQFLPKVDYSVDRIEEMPLMAAQITRLPCDGVVLGVAICRVVVDGASLGNFMSAWSKLARGEDLDSSLLVPVHDRGLLDSLGVGVGSRFEHTEFLTPPLWSEDEEEEEQRRTRGSYELGSVVLKLSKGQVEILKNKAHHHDGKDVFGNGLNSSSALSSSRPYTSFEVISGHLWRCVCKVKNEGNWSQKTRVTALVNCRNRVKPNLPQSYFGNATFPTVTPTCSFDDIVHKPLVYAVSNVRKAIERMNDEYVRSAIDYIANQKDMNSLREKLYNPGGGKSRVNSNLYIVSWANFPFYEVDFGWGKPVCLVPGSINSDGKAFVMNNGSGDDFIVAICLQKSHVDDLKKLFYDGIEEVYPNSKL 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc248g00006 478 Gene3D - 1 212 IPR023213 -
Stsc248g00006 478 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 463 - -
Stsc248g00006 478 SUPERFAMILY CoA-dependent acyltransferases 20 181 - -
Stsc248g00006 478 Gene3D - 217 467 IPR023213 -
Stsc248g00006 478 MobiDBLite consensus disorder prediction 1 22 - -
Stsc248g00006 478 Pfam Transferase family 2 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc248g00006 Stsc-Chr248 29171 34598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc248g00006 1 467 Monolignol Biosynthesis Gene Families AT5G48930 30.998 4.73e-64 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc248g00006 K13065 - gmx:100819383 448.358