Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc248g00005 ATGGGAGTAACTATCCATTCTTCTTACACCATAACCCCCTCAAATTCCTCTCCAACTACAACAACAATCCCTTTGTCACACTGTCAACAAACCAAGCTTCCAAACCATGGATCCCAACTTTACCTCTACACCTCTTCTAACGCTCCTCCTTCAATTCAAAATCTCAGATTCTCACTCACCAAAGCCTTGAATCTCTATTACCCCTTAGCAGGAAGACTCACATGGATCCATGGCGGTCGATTGCACCTTCTCTGCAACTCAAAGGGCGTCAAACTATCGGAAGCCACGTGTCACGACCATCACACAACCGTCGATGAGCTTCTCCGGAACCTCGATAACAGTGCTTTGGTGGAGCAGTTTTTGCCCAAGGTTGACTACAGCGTTGACCGGATCGAGGAGATGCCGCTGATGGCGGCACAGATCACGAGGCTGCCGTGCGACGGCGTCGTTTTGGGAGTGGCTATTTGTCGCGTTGTGGTTGACGGAGCGAGTCTTGGGAATTTCATGAGTGCGTGGTCGAAATTGGCGAGAGGTGAAGATCTGGATTCGAGTTTGTTGGTTCCGGTTCATGATCGAGGTTTGTTGGATTCGCTTGGTGTAGGTGTGGGTTCAAGATTTGAACATACTGAATTTCTAACACCGCCACTTTGGAGTGAAGATGAAGAAGAAGAAGAACAACGGCGAACACGTGGGAGCTATGAGCTTGGTAGTGTTGTTTTGAAACTCAGCAAAGGCCAAGTTGAGATACTCAAGAACAAAGCTCATCATCATGATGGTAAAGATGTCTTTGGCAATGGTTTAAACTCATCATCAGCACTTTCTTCAAGTAGGCCTTATACTAGTTTTGAGGTCATAAGTGGTCACTTATGGAGATGTGTTTGCAAGGTGAAGAATGAGGGTAATTGGAGCCAGAAAACAAGGGTAACTGCATTGGTGAATTGCAGGAACAGAGTTAAACCAAATCTTCCTCAAAGCTACTTTGGGAATGCAACGTTTCCTACCGTGACACCGACTTGTAGCTTCGATGATATTGTTCACAAGCCTCTAGTCTATGCCGTTTCGAATGTGAGGAAGGCGATCGAGCGAATGAATGATGAGTATGTAAGGTCTGCCATTGATTACATTGCTAATCAGAAGGACATGAATTCATTGAGGGAAAAACTGTATAATCCTGGAGGAGGAAAATCCAGGGTGAATTCGAATTTGTATATTGTGAGTTGGGCTAACTTTCCTTTTTATGAAGTGGATTTCGGGTGGGGAAAGCCGGTTTGTTTGGTTCCGGGAAGCATAAATTCGGACGGGAAGGCCTTTGTTATGAACAATGGAAGTGGTGATGACTTCATCGTAGCTATTTGCTTGCAAAAATCCCATGTGGATGATCTGAAGAAACTCTTTTATGATGGTATAGAGGAGATGGTGACGTTGGTAATCTTCTTTGAAATGCCGAAAGAACAAGCATTTGCCGTGGACCCGATGAACGGGAACTTGTACATAGCTGGAAGCCCACGCATCCGTTTTTACTTCTTACCCCAACAATCCTTCCAAGAACCCCTTCTAAGCCCTTCATTTGACCCGACGGAACCATATGACTTCCTCATAACAAATTTACATCCTAATCCACCACCTTCACCAACTCCTACAAATACTCACCTCTATCATATGATTCACCTATCGAAATGA 1680 0.4494 MGVTIHSSYTITPSNSSPTTTTIPLSHCQQTKLPNHGSQLYLYTSSNAPPSIQNLRFSLTKALNLYYPLAGRLTWIHGGRLHLLCNSKGVKLSEATCHDHHTTVDELLRNLDNSALVEQFLPKVDYSVDRIEEMPLMAAQITRLPCDGVVLGVAICRVVVDGASLGNFMSAWSKLARGEDLDSSLLVPVHDRGLLDSLGVGVGSRFEHTEFLTPPLWSEDEEEEEQRRTRGSYELGSVVLKLSKGQVEILKNKAHHHDGKDVFGNGLNSSSALSSSRPYTSFEVISGHLWRCVCKVKNEGNWSQKTRVTALVNCRNRVKPNLPQSYFGNATFPTVTPTCSFDDIVHKPLVYAVSNVRKAIERMNDEYVRSAIDYIANQKDMNSLREKLYNPGGGKSRVNSNLYIVSWANFPFYEVDFGWGKPVCLVPGSINSDGKAFVMNNGSGDDFIVAICLQKSHVDDLKKLFYDGIEEMVTLVIFFEMPKEQAFAVDPMNGNLYIAGSPRIRFYFLPQQSFQEPLLSPSFDPTEPYDFLITNLHPNPPPSPTPTNTHLYHMIHLSK 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc248g00005 559 SUPERFAMILY CoA-dependent acyltransferases 20 181 - -
Stsc248g00005 559 Gene3D - 1 212 IPR023213 -
Stsc248g00005 559 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 463 - -
Stsc248g00005 559 MobiDBLite consensus disorder prediction 1 22 - -
Stsc248g00005 559 Pfam Transferase family 2 465 - -
Stsc248g00005 559 Gene3D - 217 467 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc248g00005 Stsc-Chr248 21874 34568 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc248g00005 1 467 Monolignol Biosynthesis Gene Families AT5G48930 31.064 1.21e-62 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc248g00005 K13065 - gmx:100819383 447.973