Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2489g00001 GTGGAAAACATCCTTGAACGATATGAGAGACATGTAAATGCATTGAAATTTAATGGAGGTGAAAATGGATCACAGGAAAACTATTCATTGGAATATTTCAAGCTCAAGAGCAAAGCTGAAGTCTTAGAGAGAAATACAAGGAACTTGGCGGGAAATGATCTTGATCCATTGAGCCTGAGAGAGCTTCAGAATTTAGAGAATCAGCTTGAAGCATCTTTAAAGCGTATCAGAGCAAGAAAGAACAATACTATGAATGAATCCATCTCGGAGCTGCATAAAAAG 282 0.3759 VENILERYERHVNALKFNGGENGSQENYSLEYFKLKSKAEVLERNTRNLAGNDLDPLSLRELQNLENQLEASLKRIRARKNNTMNESISELHKK 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2489g00001 94 ProSiteProfiles K-box domain profile. 25 94 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc2489g00001 94 Pfam K-box region 24 94 IPR002487 GO:0003700|GO:0005634|GO:0006355
Stsc2489g00001 94 Coils Coil 59 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2489g00001 Stsc-Chr2489 71 5732 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2489g00001 1 94 MADS-box Gene Family AT5G60910 56.842 3.95e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2489g00001 K09264 - gmx:100820188 108.612