Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc2483g00001 GGTGTAGTTGGTCTTGGCGGGTTAGGACACGTGGCAGTCAAATTTGCCAAAGCTTTTGGTGCTAAAGTCACTGTTATCAGTACCTCACCCCACAAAAAGGAGGAAGCAATTCAACATTTGGGAGCTGATTCGTTTTTGTTGAGTCGTGACCAAGATCTGATGCACGGTGCAAAGGAAAGCTTGGATGGTATCATAGACACAATTTCTGCTGTTCATCCTTTGGTGGCTCTCATTGGTTTATTGAAGTCTCATGGCAAACTTGTAATGGTTGGAGCACCTGAGATGCCTCTAGAACTGCCTGTCATTCCTTTACTCATGGGGAGAAAGCTAGTAGCTGGTAGTGGCATTGGAGGGTTAAAAGAGACTCAGGAGATGATTGATTTTGCTGCAAAACACAATGTGAGACCTGATATCGAAGTCATTCCTATTGATTATGTCAACACAGCAATGGAGCGCCTCCTTAAATCAGATGTCAAGTATCGCTTCGTCATTGACATTGGAAACACTCTGAAACAAACCTCTTAA 525 0.4362 GVVGLGGLGHVAVKFAKAFGAKVTVISTSPHKKEEAIQHLGADSFLLSRDQDLMHGAKESLDGIIDTISAVHPLVALIGLLKSHGKLVMVGAPEMPLELPVIPLLMGRKLVAGSGIGGLKETQEMIDFAAKHNVRPDIEVIPIDYVNTAMERLLKSDVKYRFVIDIGNTLKQTS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc2483g00001 174 Pfam Zinc-binding dehydrogenase 7 130 IPR013149 -
Stsc2483g00001 174 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 134 IPR036291 -
Stsc2483g00001 174 PANTHER ALDEHYDE REDUCTASE 1 169 IPR047109 GO:0016616
Stsc2483g00001 174 Gene3D - 137 166 - -
Stsc2483g00001 174 FunFam Cinnamyl alcohol dehydrogenase 1 136 - -
Stsc2483g00001 174 Gene3D - 1 136 - -
Stsc2483g00001 174 FunFam Putative cinnamyl alcohol dehydrogenase 6 137 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc2483g00001 Stsc-Chr2483 17 894 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc2483g00001 7 171 Monolignol Biosynthesis Gene Families AT4G37990 69.091 2.31e-65 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc2483g00001 K23232 - gmx:100816901 284.263