Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc247386g00001 ATGGCTCCTAAAAGAGGTGGAAAAGCGCCAGTTCCAGCTTCAAAGAAGAAGCCTGAGAAGGTTACGAACCCTTTGTTCGAGAAGCGTCCCAAGCAGTTTGGGATCGGAGGAGCATTGCCGCCAAAGAGGGATTTGACTCGTTTCGTGAAGTGGCCTAAGACCGTACAAATCCAGAGGAAGAAGAGGATCCTCAAGCAGAGGTTGAAGGTTCCTCCAGCTTTGAACCAGTTCACTAAAACCCTTGACAAGAACCTCGCTACCAGCCTTTTCAAGATACTTCTGAAGTACAGGCCTGAGGATAAAGCTGAAAAGAAGGAGCGACTTTTGAAAAGGGCCCAGGCAGAGACCGAGGGCAAAACTGTTGAAGCTAAGAAGCCTATTGTTGTGAAATATGGTCTAAATCATGTTACCTACCTTATTGAGCAGAACAAAGCTCAATTGGTTGTGATTGCTCATGATGTGGACCCAATTGAATTGGTTGTCTGGCTTCCAGCATTGTGTAGGAAGATGGAAATTCCATACTGCATTGTCAAGGG 536 0.4627 MAPKRGGKAPVPASKKKPEKVTNPLFEKRPKQFGIGGALPPKRDLTRFVKWPKTVQIQRKKRILKQRLKVPPALNQFTKTLDKNLATSLFKILLKYRPEDKAEKKERLLKRAQAETEGKTVEAKKPIVVKYGLNHVTYLIEQNKAQLVVIAHDVDPIELVVWLPALCRKMEIPYCIVKG 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc247386g00001 179 Gene3D - 51 179 IPR029064 -
Stsc247386g00001 179 SUPERFAMILY L30e-like 89 178 IPR029064 -
Stsc247386g00001 179 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 116 179 IPR004038 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A family signature 30 47 IPR001921 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A family signature 125 145 IPR001921 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A family signature 91 104 IPR001921 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A family signature 67 86 IPR001921 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A family signature 47 64 IPR001921 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A/RS6 family signature 148 161 IPR018492 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A/RS6 family signature 174 179 IPR018492 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A/RS6 family signature 164 174 IPR018492 -
Stsc247386g00001 179 PRINTS Ribosomal protein L7A/RS6 family signature 129 143 IPR018492 -
Stsc247386g00001 179 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 43 179 - -
Stsc247386g00001 179 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc247386g00001 Stsc-Chr247386 66 1508 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc247386g00001 1 179 Cytoplasmic Ribosomal Protein Gene Family AT3G62870 86.592 1.94e-112 318