Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc246564g00001 TTGACTGATTTTGGACTATCTAAAGTTGGCCTTATCAACAGCACAGATGACTTATCAGCACCATCATTTCACAATAATGGTTTTCTAGGAGAAGATGAACAAAAACCTCGACATTATTCTAAAAGGGAAGAACGTCGAAAGCATGCAGTAGTTGGCACCCCAGATTATTTGGCACCGGAAATACTTCTTGGGATGGGACATGGTGCAACTGCAGATTGGTGGTCCGTGGGTGTGATTCTTTATGAGCTTATTGTGGGTATTCCACCATTCAATGCAGAACATCCCCAG 288 0.4271 LTDFGLSKVGLINSTDDLSAPSFHNNGFLGEDEQKPRHYSKREERRKHAVVGTPDYLAPEILLGMGHGATADWWSVGVILYELIVGIPPFNAEHPQ 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc246564g00001 96 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
Stsc246564g00001 96 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 96 - -
Stsc246564g00001 96 MobiDBLite consensus disorder prediction 18 45 - -
Stsc246564g00001 96 ProSiteProfiles Protein kinase domain profile. 1 96 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc246564g00001 96 Pfam Protein kinase domain 37 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc246564g00001 96 MobiDBLite consensus disorder prediction 30 45 - -
Stsc246564g00001 96 SUPERFAMILY Protein kinase-like (PK-like) 1 95 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc246564g00001 Stsc-Chr246564 347 802 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc246564g00001 1 96 AGC Kinase Gene Family AT5G62310 75.258 2.49e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Stsc246564g00001 Pkinase 7.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc246564g00001 - - aip:107632565 186.037