Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc245558g00001 ATGAGATCTTCATCAGAGGCTTCATCATCTCCATCATGCAGATCGAAGAAACACAACAATCTGAGCTCAAATCTCGTTTCTTCAGATTCGGATTCACTCGATACCAAGACGCCGGAGAAGTCACTTGAGCTCACGCGCCGCACGCGCAACCGTGACGTCGCGTTTCCGTGTCGGAGGTATGAGATTTTGGGCGAGTATTTTGCTAGGTTGGATTGTTCGATTCGATTGCTGCGGAGGAAAGGAATGACGCCATCTTTCGCGAAAATCAGCCACACCATTGAAAGTTTAACTGATAGGAGGTTTACACTTGGTCATTTGGCTCAGTTGAAATTTTTGTTGCCTGAGGCAATT 351 0.4672 MRSSSEASSSPSCRSKKHNNLSSNLVSSDSDSLDTKTPEKSLELTRRTRNRDVAFPCRRYEILGEYFARLDCSIRLLRRKGMTPSFAKISHTIESLTDRRFTLGHLAQLKFLLPEAI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc245558g00001 117 MobiDBLite consensus disorder prediction 1 45 - -
Stsc245558g00001 117 PANTHER DNA REPLICATION FACTOR CDT1 20 117 IPR045173 GO:0003677|GO:0030174|GO:0071163
Stsc245558g00001 117 Pfam DNA replication factor CDT1 like 59 117 IPR014939 -
Stsc245558g00001 117 MobiDBLite consensus disorder prediction 1 32 - -
Stsc245558g00001 117 SUPERFAMILY "Winged helix" DNA-binding domain 59 117 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc245558g00001 Stsc-Chr245558 717 1414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc245558g00001 59 117 Core DNA Replication Machinery Family AT2G31270 52.542 6.79e-15 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc245558g00001 K10727 - rvl:131314679 86.6557