Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244999g00001 ATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGTGTAGGCGGATCTACCCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCGCTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGGTGCTGCAAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA 330 0.4273 MKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVGAAKGSGDAIRKKEETHRMAEANRAFAHFR 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244999g00001 109 Pfam Ribosomal protein S7p/S5e 1 103 IPR023798 -
Stsc244999g00001 109 NCBIfam 30S ribosomal protein S7 1 109 IPR005717 GO:0003735|GO:0006412|GO:0015935
Stsc244999g00001 109 SUPERFAMILY Ribosomal protein S7 1 103 IPR036823 -
Stsc244999g00001 109 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 1 109 IPR000235 GO:0006412
Stsc244999g00001 109 Gene3D Ribosomal protein S7 domain 1 109 IPR036823 -
Stsc244999g00001 109 PANTHER RIBOSOMAL PROTEIN S7 1 103 IPR000235 GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244999g00001 Stsc-Chr244999 2843 3473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244999g00001 1 103 Cytoplasmic Ribosomal Protein Gene Family AT3G11940 33.636 7.89e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244999g00001 K02992 - qsa:O6P43_035699 211.846