Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244671g00002 ATGCCCTTAATTTTGTGTCTGAACTTCATTGGGTCCTCATCTTACCATTTTGTCTATAGGCGGACGCGACCACCCCTTACTAAGCACCTACTCTTCTCATTCTTCTTGCTTGGATTACTTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTCTAAACTTGACTAATCCAACATATGCAGCAGCAGCACAGCCAGCCGTTCCGGTCTTTACATTTCTGTTTTCTACAATCATGGGCACAGAGAAAGTGAACTTGCTAAGATATGAGGGTATGGCAAAGGTTGGAGGGACTATTATATGTGTCTCTGGAGCCATATCAATGGTGTTGTATCGCGGTCCGGTTATTATAGGAAATTCAGAAACAGGAATGGAGCATGTATCTCAGAATCCATCTGGATTGTTAATGGATGGATTGAAGGATATAGGATTTGACCAATTCAGTCTTGGGGTTATCTGCTTAATAGGGAATTGCATGTGCATGGCGGTTTATCTAACCATTCAGGCAAAATTGTTGAAGAAGTACCCCACAAACCTGTCTCTCACAGCATATTCCTACTTCTTTGGAACTGTATTAATGGTGATAGTCTCAATTTTCATGACTGATGGGATAACTGACTGGACTTTGACACAGCCAGAAATACTTGCCGTTCTTTATGCTGGAATTTTTGCATCTGCCCTTGGTTATGGACTAGTAACATGGTGTAACAAGATTGTGGGGCCAACAATGGTTTCCCTTTATAACTCCCTTCAACCTGCATTCTCTACCCTGCTCTCCCTAATCTTCCTTGGAAGTCCTGTTTACATGGGAAGCATACTGGGAGGAACTGCTATCCTTGTTGGCCTGTATATTGTTATTTGGGGATCTTACAAAGAAAAGCAAGCAGATGCTGCTCAAGTTATTCCTTGTGATTCTTGTGTGTCTGAGCCACTTATTCATAAAAAGACAGTGTGTTAA 957 0.4169 MPLILCLNFIGSSSYHFVYRRTRPPLTKHLLFSFFLLGLLGIFGNQLLFLIGLNLTNPTYAAAAQPAVPVFTFLFSTIMGTEKVNLLRYEGMAKVGGTIICVSGAISMVLYRGPVIIGNSETGMEHVSQNPSGLLMDGLKDIGFDQFSLGVICLIGNCMCMAVYLTIQAKLLKKYPTNLSLTAYSYFFGTVLMVIVSIFMTDGITDWTLTQPEILAVLYAGIFASALGYGLVTWCNKIVGPTMVSLYNSLQPAFSTLLSLIFLGSPVYMGSILGGTAILVGLYIVIWGSYKEKQADAAQVIPCDSCVSEPLIHKKTVC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244671g00002 318 PANTHER WAT1-RELATED PROTEIN 15 293 IPR030184 GO:0016020|GO:0022857
Stsc244671g00002 318 Pfam EamA-like transporter family 15 93 IPR000620 GO:0016020
Stsc244671g00002 318 Pfam EamA-like transporter family 149 286 IPR000620 GO:0016020
Stsc244671g00002 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 20 101 - -
Stsc244671g00002 318 SUPERFAMILY Multidrug resistance efflux transporter EmrE 186 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244671g00002 Stsc-Chr244671 3082 5027 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244671g00002 51 315 Nodulin-like Gene Family AT5G45370 53.818 1.42e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244671g00002 - - gmx:100787738 385.185