Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244671g00001 ATGGCGAATGACGCTTCAGGATCAGGATCAGTGAGGGGTGTTGATGAGAAATGGAAGACACAGTTAGCCCTGTTAATGGGGCCTCTAATCTATGGTGCATACCCTGTCATTACAAAAGTAGCACTCAATGATGGTGTCAACCAACTAGTCTTCTGTGTCTACAGAGTTCTCATTGGCCTTCTAGTCCTTTCTCCTTTTGCTTATTTCCTAGAAAGGCGGACGCGACCACCCCTTACTAAGCACCTACTCTTCTCATTCTTCTTGCTTGGATTACTTGGGATATTTGGCAACCAGCTTTTGTTTCTTATTGGTCTAAACTTGACTAATCCAACATATGCAGCAGCAGCACAGCCAGCCGTTCCGGTCTTTACATTTCTGTTTTCTACAATCATGGGCACAGAGAAAGTGAACTTGCTAAGATATGAGGGTATGGCAAAGGTTGGAGGGACTATTATATGTGTCTCTGGAGCCATATCAATGGTGTTGTATCGCGGTCCGGTTATTATAGGAAATTCAGAAACAGGAATGGAGCATGTATCTCAGAATCCATCTGGATTGTTAATGGATGGATTGAAGGATATAGGATTTGACCAATTCAGTCTTGGGGTTATCTGCTTAATAGGGAATTGCATGTGCATGGCGGTTTATCTAACCATTCAGGCAAAATTGTTGAAGAAGTACCCCACAAACCTGTCTCTCACAGCATATTCCTACTTCTTTGGAACTGTATTAATGGTGATAGTCTCAATTTTCATGACTGATGGGATAACTGACTGGACTTTGACACAGCCAGAAATACTTGCCGTTCTTTATGCTGGAATTTTTGCATCTGCCCTTGGTTATGGACTAGTAACATGGTGTAACAAGATTGTGGGGCCAACAATGGTTTCCCTTTATAACTCCCTTCAACCTGCATTCTCTACCCTGCTCTCCCTAATCTTCCTTGGAAGTCCTGTTTACATGGGAAGCATACTGGGAGGAACTGCTATCCTTGTTGGCCTGTATATTGTTATTTGGGGATCTTACAAAGAAAAGCAAGCAGATGCTGCTCAAGTTATTCCTTGTGATTCTTGTGTGTCTGAGCCACTTATTCATAAAAAGACAGTGTGTTAA 1113 0.4241 MANDASGSGSVRGVDEKWKTQLALLMGPLIYGAYPVITKVALNDGVNQLVFCVYRVLIGLLVLSPFAYFLERRTRPPLTKHLLFSFFLLGLLGIFGNQLLFLIGLNLTNPTYAAAAQPAVPVFTFLFSTIMGTEKVNLLRYEGMAKVGGTIICVSGAISMVLYRGPVIIGNSETGMEHVSQNPSGLLMDGLKDIGFDQFSLGVICLIGNCMCMAVYLTIQAKLLKKYPTNLSLTAYSYFFGTVLMVIVSIFMTDGITDWTLTQPEILAVLYAGIFASALGYGLVTWCNKIVGPTMVSLYNSLQPAFSTLLSLIFLGSPVYMGSILGGTAILVGLYIVIWGSYKEKQADAAQVIPCDSCVSEPLIHKKTVC 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244671g00001 370 Pfam EamA-like transporter family 201 338 IPR000620 GO:0016020
Stsc244671g00001 370 Pfam EamA-like transporter family 22 145 IPR000620 GO:0016020
Stsc244671g00001 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 152 - -
Stsc244671g00001 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 343 - -
Stsc244671g00001 370 PANTHER WAT1-RELATED PROTEIN 22 345 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244671g00001 Stsc-Chr244671 3082 5027 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244671g00001 103 367 Nodulin-like Gene Family AT5G45370 53.818 8.72e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244671g00001 - - psat:127119930 446.817