Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244287g00001 ATGCACACCAACATGAAGAGTCCACCAAACTACTCCTCGACCTTCCAAAACCTAATCAACACATTCAAAACCATGTTAGTGAAGAAATCACCGTCTATGATCTTGCCACGTAGCATCTCACGCAAGCTTTCATCATCATCATCATCATCAAGAAGGTCAAGAAACCAAACCTTTTGCAAAGGAAGCACTGATGAAGTCAAAGTCAGCACCGTCAAGATCAAGGACATTATACGGTGGAGATCTTTCAAGGATGTTACTGTGGAGGAGGAGGAGGTGGAGCACGGTAAGAAATCTCCTCTATCAAAATCACAACCGTTGGATTTCTCACGGAAATCTCCACCGTTGGATTTTCACCGTTGCATGATGATGGGGTCCACCACAACTACAACCACCACCACGTGTAGTAGCAGCAATGGGTCTAGCTGGAACGAGAGTGATTTTACCTCAATAGCCTCAGGGTACTTGTCTTCGTGGGAAGAACAAAACGGCACCGTTTTGGAAAGTGAGAAATTTCCACTTTCACCCCTTAATATAGTTGTCGGCAAGGATTTGGGGCAACAAACAACAAATATTATGGAAACCAAAACCAAGGAAATTTCAAGTTTCGAAGAAGATGAACAAAATAGTCCAATTTCAGTTCTTCAAATTGGAAAAGATGAATTCCCACACTATAATCAAAGCCTTGCCGATATTGAAAGAAGAAAACAAAAGTTGATGGACACCTTTCAAATAATTGAGAGCCTTGCAAAGTTTGACCTACCAAACCTAGACCAATATATCATATTGGATGAGAACTTCAGCTTCAATAATGAAGATTGTGATAATGATGATTATGAAGTTGAAGAACAAGATTATGTTTCAGAAAGGGCAATGAAGCTACTAAATTGTGTGAAGGCAACATGTGCATTACAACGCTATGATTTTGATATACTATTGCTGGATTTTTTCAAGGAAGAATTAACCAAGAATATTATTGATGATGAGGAGTGTGAAAATGAGTCACAGATATTGAGAGTGGCTAAGGAATGGGCAAAAGGGTCATTTGGTTATGACATAGGTGATGTGAATAATTATGCTTGTATCAAAGACATGGATAAAAGAGGTGAATGGAGCAAGTTTGAAAAAGAGAAAGAAGAATTAGGGTTGGAGATTGAAAAGGAGATATTTCATAGTTTGGTTGATGAACTTTTGGACTTACATCATTGA 1206 0.3881 MHTNMKSPPNYSSTFQNLINTFKTMLVKKSPSMILPRSISRKLSSSSSSSRRSRNQTFCKGSTDEVKVSTVKIKDIIRWRSFKDVTVEEEEVEHGKKSPLSKSQPLDFSRKSPPLDFHRCMMMGSTTTTTTTTCSSSNGSSWNESDFTSIASGYLSSWEEQNGTVLESEKFPLSPLNIVVGKDLGQQTTNIMETKTKEISSFEEDEQNSPISVLQIGKDEFPHYNQSLADIERRKQKLMDTFQIIESLAKFDLPNLDQYIILDENFSFNNEDCDNDDYEVEEQDYVSERAMKLLNCVKATCALQRYDFDILLLDFFKEELTKNIIDDEECENESQILRVAKEWAKGSFGYDIGDVNNYACIKDMDKRGEWSKFEKEKEELGLEIEKEIFHSLVDELLDLHH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244287g00001 401 PANTHER OS04G0572500 PROTEIN 10 397 - -
Stsc244287g00001 401 MobiDBLite consensus disorder prediction 38 61 - -
Stsc244287g00001 401 Pfam Domain of unknown function (DUF4378) 362 395 IPR025486 -
Stsc244287g00001 401 MobiDBLite consensus disorder prediction 88 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244287g00001 Stsc-Chr244287 281 2627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244287g00001 12 397 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 30.404 4.26e-28 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244287g00001 - - adu:107475793 550.436