Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244245g00001 ATGCCACGGGATTCTGGCTACTTAGCTGGAGAAAAATTGGGGTATGAAAATTCTTCTAGAATTGAGCAAAAACGTGACCATCAACAATTTTTAAATATAGATGAACCAGAAACACTCAGCAACAAGAAACAAGCAGTTGAAGCTATTGGTGGTAATCCATTTTCAAGAGTTTCACATGTGAATGTTTCTCCATGGGACACCAATTCAGGGTTGCACTCTGTCACAAGTCAATTTTGTGACCGTCTCTTTGGATCTGATCTTGGATGGGCTATCAATTTGGTTGATAAAACTGGAAGTAGAAGTTTGAACGTGGTTAGGAGGGATGTTGAGAATCAATCTGATAATGAACCATCTGTTGGTTTGTCAAGATCTCATTCCATTGCAGATACTTCATCAAATCCCAATTTCAATAGCATCAGAAAGGTTAAAGTCAATCAAGTCAAGGATTCTTTCGATTTGTTTCCTTCATCCATACAGCACCCATATAGTAGTACTGATTATAGTACAATTTCAATAGCGACGGGCTACAATAGGAATGATGGGAAAATATGGTTGGGTTCAGATTATACCAATGAGAATGAAAATACCATTGCAATGGGCACTGGAAATAGCAAGATCAATAGCAATCCTATTTCAATGGGTAATGCCTTCAATATACGTGATGGGAGTTTATTGTCGATGCACCAAACTTATGGCTTGGCAATGAGTCATCCCTTTAACATGGCAGATTTCATACCTATGGATCAATCAAATAATAAGGCTCTTGAAAGCTCATATCCAAAGCGGGGTGAGAACTCCGTACCAATGGGAGCAATTTACAGCAAATCAGCACAAGATTTCATAAATATTAGTCCTTTCTATGGCAAGGGCACTGAGCATATGTTATCCTTGGGTCCAACATATGTTAGTTCGGATTTAAACATCCCACCAACAGGAAATTCTAGGTCTTCACTGGCAGGTACCATGCCCTTTGTTGCTCTTACTAGTAATTCTGAACCGAATCCCTCTGTCGGAATCATGAATGGATATAATCTATTAATGGTCAATCAGAGTTTAGCTCAAGGTCTTGATAGCCAGAATAAGGATCAGATTAATCCAAATGCCGAAGAACCTGCAAATAACACTCAAACAACTGGTACTCAAAGTGATACTACACAGAAGAAGAACAAAGAGAAGAAAACCAGGAAGGCTTCATCTAACAACTTCCCTTCAAATGTCAAAAGCTTGTTGTCAACTGGTATTTTTGATGGTGTTCCTGTGAAATATGTTTCATGGTCTCGGGAGAAAACCCTGGGAGCAGTCATAAAAGGAATTGGGTATCTGTGTTCATGTGATGAATGCAAGGAACCACAGCCTCTAAATGCTTATGAGTTTGAGCGCCATGCTGGTTCTAAGACCAAACACCCTAACAACCACATATACTTTGAGAACGGAAAAACCGTCTATGGTGTGGTTCAAGAGCTGAAAAGCACTCCACAGGAGATGCTCTTTGATGCAATTCAAAATGTCACTGGCTCCACTGTCAACCAGAAGAACTTTCAGAGTTGGAAAGCATCATATCAAGCTGCTGCAAAAGAGCTTCAGCGTATATATGGAGCAAATGAAGTGACCACTCTATAA 1620 0.3969 MPRDSGYLAGEKLGYENSSRIEQKRDHQQFLNIDEPETLSNKKQAVEAIGGNPFSRVSHVNVSPWDTNSGLHSVTSQFCDRLFGSDLGWAINLVDKTGSRSLNVVRRDVENQSDNEPSVGLSRSHSIADTSSNPNFNSIRKVKVNQVKDSFDLFPSSIQHPYSSTDYSTISIATGYNRNDGKIWLGSDYTNENENTIAMGTGNSKINSNPISMGNAFNIRDGSLLSMHQTYGLAMSHPFNMADFIPMDQSNNKALESSYPKRGENSVPMGAIYSKSAQDFINISPFYGKGTEHMLSLGPTYVSSDLNIPPTGNSRSSLAGTMPFVALTSNSEPNPSVGIMNGYNLLMVNQSLAQGLDSQNKDQINPNAEEPANNTQTTGTQSDTTQKKNKEKKTRKASSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKTLGAVIKGIGYLCSCDECKEPQPLNAYEFERHAGSKTKHPNNHIYFENGKTVYGVVQELKSTPQEMLFDAIQNVTGSTVNQKNFQSWKASYQAAAKELQRIYGANEVTTL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244245g00001 539 PANTHER AUTOIMMUNE REGULATOR 12 519 - -
Stsc244245g00001 539 Pfam Tify domain binding domain 434 488 IPR032308 -
Stsc244245g00001 539 MobiDBLite consensus disorder prediction 109 135 - -
Stsc244245g00001 539 MobiDBLite consensus disorder prediction 358 404 - -
Stsc244245g00001 539 MobiDBLite consensus disorder prediction 114 135 - -
Stsc244245g00001 539 MobiDBLite consensus disorder prediction 358 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244245g00001 Stsc-Chr244245 945 2848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244245g00001 392 521 PHD Transcription Factor Family AT3G53680 53.846 1.09e-39 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244245g00001 - - adu:107486410 748.429