Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244151g00002 ATGTCTGAAATCACAAACAAAGCCGAGCTACCTGCTTCAAGTCAGAATGAAATAAGCATTCCAAAATCTAAGAGTAAGGATAATGGACACAAAGCAAAATTGGGTGATGACAAGGATGGCAACAGCATGCCCTCGGGACCAGTGAAGCGAAGAAGGTTGCGGCCTTCTGGTCAGAAAAAGGTTGCACCATCTGAGGGGTCTACCTCAGCCCAAGTCATGCTAGATTCGACAAGGGGATATTGCAACAGAAAGAACACCCCTATTTGGTTTTCATTAGTTGCTTCAGAGGACCAGAAAGGAGATGTTCCCTCGCCACAAATCTCAGCATGTTACTTAAGAATCAAGGATGACACTGTGCCTGTTTCGTTTATTCAAAAGTACCTTGTGAAGAAACTTAATCTTGCCAGTGAAGCAGAGGTGGAAATAATGTGTCGGGGTCAACCAGTGCTGCCATCTCTGCAACTACACAATCTTGTAGATTTGTGGTTCAGAACAGCATCAACTTCAAAAAAGATACCAGCATCTGTAGGATCATCAGCCAAGGATTTTGTTATGGTTTTATCATATTGTCGAAAGGCCTTGCCTCCTTGA 591 0.4349 MSEITNKAELPASSQNEISIPKSKSKDNGHKAKLGDDKDGNSMPSGPVKRRRLRPSGQKKVAPSEGSTSAQVMLDSTRGYCNRKNTPIWFSLVASEDQKGDVPSPQISACYLRIKDDTVPVSFIQKYLVKKLNLASEAEVEIMCRGQPVLPSLQLHNLVDLWFRTASTSKKIPASVGSSAKDFVMVLSYCRKALPP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244151g00002 196 MobiDBLite consensus disorder prediction 23 38 - -
Stsc244151g00002 196 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 12 194 IPR044807 GO:0004842
Stsc244151g00002 196 Gene3D - 68 173 - -
Stsc244151g00002 196 MobiDBLite consensus disorder prediction 1 22 - -
Stsc244151g00002 196 MobiDBLite consensus disorder prediction 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244151g00002 Stsc-Chr244151 3075 6204 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244151g00002 9 189 C3H Transcription Factor Family AT3G23060 34.896 4.18e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244151g00002 K16277 - gmx:100783999 325.094