Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244115g00001 ATGCAGGAGAGAGGTCTACAAGCACCTCAAAAATCAAGGCACTGCTTAGCTCCTGGAACAGTAAAGTTTGCTGCATTTCATGTTCTCTCACTTGAAGGTGGCACAAGAATGACACTATTTGAGCTTGCAAAAGAAATTCAGGTAGTTTACATATTGGATCAAGGGAGAGCTCTAGAAGTAGAATTGCTAATCAGAATTAAGCAACAAGATATTCGATTAAAGCCTCAAGGCCAAGATGATGGGAAGGAAAGTAATAGGCATTGCTATGGTTTTCATTGA 279 0.3978 MQERGLQAPQKSRHCLAPGTVKFAAFHVLSLEGGTRMTLFELAKEIQVVYILDQGRALEVELLIRIKQQDIRLKPQGQDDGKESNRHCYGFH 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244115g00001 92 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 48 IPR044977 GO:0006357
Stsc244115g00001 92 Pfam Sucrose synthase 47 76 IPR000368 GO:0005985|GO:0016157
Stsc244115g00001 92 MobiDBLite consensus disorder prediction 73 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244115g00001 Stsc-Chr244115 139 1429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244115g00001 1 47 Homeobox Transcription Factor Family AT1G28420 70.213 3.46e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244115g00001 - - gmx:100777465 70.4774