Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244070g00002 ATGCCAAAGGGGAGCTTGGAGAATCATCTTTTCCGAAGGAATCCTAACATCGAACCACTTTCGTGGAACACCCGAATTAAGATAGCTATTGGCGCAGCAAGGGGCCTCGCTTTCTTGCATGCTTCAGAGAAACAAGTCATATACCGAGATTTCAAGGCTTCGAATATACTACTTGATGGGAATTACAATGCGAAAATCTCAGATTTTGGCTTGGCTAAATTAGGCCCTGCTGGGGGAGAATCGCATGTAACTACCCGGGTCATGGGCACGTATGGCTATGCTGCTCCGGAATACATCGCGACAGGCCACTTGTATGTGAAGAGTGATGTGTATGGCTTCGGCGTAGTCCTACTTGAAATGATCTCAGGCATGCGTGCGCTCGATACGAAGCGGCCGACAGGGCAACAGAATCTTGTTGAATGGGTTAAGCCTAATCTCTCCAACAAGAGAAAGTTGAAAACCATAATGGATGCCAGGATTGAAGGCCAATATTCACAAAAAGCGGCGCAGCAGGCGGCGCAACTCACTCTAAAATGCTTGGAACCGGACCCCAAAAACCGGCCGTCGATGAAAGAAGTTGTGGAGGCATTGGAAGCCATAGATGCAATGCAAGATAAATCCAAGGAATCCAAGAACAGAAGTTCTCATCATTCTTCTGCAGCCTCTAAGAATCACCATCATGCAAGGCAAAGAGTTTCAAAAGCAAAAGTATGA 714 0.4678 MPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMISGMRALDTKRPTGQQNLVEWVKPNLSNKRKLKTIMDARIEGQYSQKAAQQAAQLTLKCLEPDPKNRPSMKEVVEALEAIDAMQDKSKESKNRSSHHSSAASKNHHHARQRVSKAKV 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244070g00002 237 ProSiteProfiles Protein kinase domain profile. 1 200 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc244070g00002 237 PIRSF ILK 1 218 - -
Stsc244070g00002 237 MobiDBLite consensus disorder prediction 200 237 - -
Stsc244070g00002 237 FunFam Serine/threonine-protein kinase PBS1 1 217 - -
Stsc244070g00002 237 PANTHER OS01G0588500 PROTEIN-RELATED 1 200 - -
Stsc244070g00002 237 Gene3D Transferase(Phosphotransferase) domain 1 1 227 - -
Stsc244070g00002 237 Pfam Protein kinase domain 4 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc244070g00002 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Stsc244070g00002 237 MobiDBLite consensus disorder prediction 218 237 - -
Stsc244070g00002 237 MobiDBLite consensus disorder prediction 200 216 - -
Stsc244070g00002 237 SUPERFAMILY Protein kinase-like (PK-like) 1 199 IPR011009 -
Stsc244070g00002 237 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244070g00002 Stsc-Chr244070 5192 6746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244070g00002 1 207 Glycoside Hydrolase AT3G07070 52.885 2.02e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc244070g00002 Pkinase 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244070g00002 - - pvy:116127793 362.459