Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244070g00001 ATGATTCTAGAGATGCTGATAATTTCACATTCTTTAGCTAAATGTTCAGAAGTAAACTTCTTAGGAAGGCTTTCTCACCCGAACCTGGTAAAGCTATTAGGGTACTGTTGGGACGACGACGAGCTTCTGCTTGTGTATGAGTTCATGCCAAAGGGGAGCTTGGAGAATCATCTTTTCCGAAGGAATCCTAACATCGAACCACTTTCGTGGAACACCCGAATTAAGATAGCTATTGGCGCAGCAAGGGGCCTCGCTTTCTTGCATGCTTCAGAGAAACAAGTCATATACCGAGATTTCAAGGCTTCGAATATACTACTTGATGGGAATTACAATGCGAAAATCTCAGATTTTGGCTTGGCTAAATTAGGCCCTGCTGGGGGAGAATCGCATGTAACTACCCGGGTCATGGGCACGTATGGCTATGCTGCTCCGGAATACATCGCGACAGGCCACTTGTATGTGAAGAGTGATGTGTATGGCTTCGGCGTAGTCCTACTTGAAATGATCTCAGGCATGCGTGCGCTCGATACGAAGCGGCCGACAGGGCAACAGAATCTTGTTGAATGGGTTAAGCCTAATCTCTCCAACAAGAGAAAGTTGAAAACCATAATGGATGCCAGGATTGAAGGCCAATATTCACAAAAAGCGGCGCAGCAGGCGGCGCAACTCACTCTAAAATGCTTGGAACCGGACCCCAAAAACCGGCCGTCGATGAAAGAAGTTGTGGAGGCATTGGAAGCCATAGATGCAATGCAAGATAAATCCAAGGAATCCAAGAACAGAAGTTCTCATCATTCTTCTGCAGCCTCTAAGAATCACCATCATGCAAGGCAAAGAGTTTCAAAAGCAAAAGTATGA 858 0.458 MILEMLIISHSLAKCSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPAGGESHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEMISGMRALDTKRPTGQQNLVEWVKPNLSNKRKLKTIMDARIEGQYSQKAAQQAAQLTLKCLEPDPKNRPSMKEVVEALEAIDAMQDKSKESKNRSSHHSSAASKNHHHARQRVSKAKV 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244070g00001 285 PIRSF ILK 13 266 - -
Stsc244070g00001 285 Pfam Protein kinase domain 15 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc244070g00001 285 FunFam Serine/threonine-protein kinase PBS1 49 264 - -
Stsc244070g00001 285 PANTHER OS01G0588500 PROTEIN-RELATED 15 248 - -
Stsc244070g00001 285 MobiDBLite consensus disorder prediction 248 285 - -
Stsc244070g00001 285 Gene3D Phosphorylase Kinase; domain 1 11 49 - -
Stsc244070g00001 285 SUPERFAMILY Protein kinase-like (PK-like) 16 247 IPR011009 -
Stsc244070g00001 285 ProSitePatterns Serine/Threonine protein kinases active-site signature. 94 106 IPR008271 GO:0004672|GO:0006468
Stsc244070g00001 285 MobiDBLite consensus disorder prediction 266 285 - -
Stsc244070g00001 285 ProSiteProfiles Protein kinase domain profile. 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc244070g00001 285 MobiDBLite consensus disorder prediction 248 264 - -
Stsc244070g00001 285 Gene3D Transferase(Phosphotransferase) domain 1 50 275 - -
Stsc244070g00001 285 Coils Coil 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244070g00001 Stsc-Chr244070 5192 6976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244070g00001 17 255 Glycoside Hydrolase AT3G07070 53.333 1.98e-86 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Stsc244070g00001 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244070g00001 - - gmx:100794193 431.024