Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc244028g00001 ATGGATACTCAAAGTCTGCAGTATTTGGAGATATCTGATTGTCCACAATTGTCATCTCTTCCTGACAACATGTATACTCAAAGTCTGCAGTCGTTGAAAATATCTAATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTAAAAGTCTGCAGTATTTGTATATATCTCATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTCAAAGTCTGCAGTCTTTGCGTATATCTTATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTAAAAGTCTGCAGTCTTTGAATATATCTGATTGTCAACAATTGTCATCTCTTCCTGACAACATGGATACTAAAAGTCTGCAGTCTTTGAATATATCTGATTGTCAACAATTGTCATCTCTTCCTGACAACATGGATACTAAAAGTCTGCAGTCTTTGTATATATCTGATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTCAAAGTCTGCAGTCTTTGTATATATCTGATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTCAAAGTCTGCAGTCTTTGGATATATCTGATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTCAAAGTCTGCAGTCTTTGGATATATTTGAGTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTAAAAGTCTGCAGTCTTTGCGTATATTTAATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTCAAAGTCTGCAGTCTTTGGATATATTTGAGTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTAAAAGTCTGCAGTCTTTGCGTATATTTAATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTCAAAGTCTGCAGTCTTTGGGAATAACTGATTGTCCACAATTGTCATCTCTTCCTGACAACATGGATACTCAAAGTCTGCAGTCTTTGTATATAAGGTATTGTCCTATACTAAGGCAAAGGTATAATAAGAGGACAGGTCCGGATTGGGGCAAAATTGCTCATATCCCGCATTGCGAGATTGATTTGATTGACCATTACGAAGAAGATGAAGATTCAGAAGAAGATGAAGATGGACAAGAGCAGAAGGATGAAGTTGAAGACTGA 1170 0.3778 MDTQSLQYLEISDCPQLSSLPDNMYTQSLQSLKISNCPQLSSLPDNMDTKSLQYLYISHCPQLSSLPDNMDTQSLQSLRISYCPQLSSLPDNMDTKSLQSLNISDCQQLSSLPDNMDTKSLQSLNISDCQQLSSLPDNMDTKSLQSLYISDCPQLSSLPDNMDTQSLQSLYISDCPQLSSLPDNMDTQSLQSLDISDCPQLSSLPDNMDTQSLQSLDIFECPQLSSLPDNMDTKSLQSLRIFNCPQLSSLPDNMDTQSLQSLDIFECPQLSSLPDNMDTKSLQSLRIFNCPQLSSLPDNMDTQSLQSLGITDCPQLSSLPDNMDTQSLQSLYIRYCPILRQRYNKRTGPDWGKIAHIPHCEIDLIDHYEEDEDSEEDEDGQEQKDEVED 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc244028g00001 389 SMART LRR_bac_2 302 322 - -
Stsc244028g00001 389 SMART LRR_bac_2 3 23 - -
Stsc244028g00001 389 SMART LRR_bac_2 141 161 - -
Stsc244028g00001 389 SMART LRR_bac_2 164 184 - -
Stsc244028g00001 389 SMART LRR_bac_2 26 46 - -
Stsc244028g00001 389 SMART LRR_bac_2 187 207 - -
Stsc244028g00001 389 SMART LRR_bac_2 72 92 - -
Stsc244028g00001 389 SMART LRR_bac_2 118 138 - -
Stsc244028g00001 389 SMART LRR_bac_2 95 115 - -
Stsc244028g00001 389 SMART LRR_bac_2 49 69 - -
Stsc244028g00001 389 SUPERFAMILY L domain-like 4 343 - -
Stsc244028g00001 389 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 120 231 IPR039203 GO:0050832
Stsc244028g00001 389 Gene3D Ribonuclease Inhibitor 72 214 IPR032675 -
Stsc244028g00001 389 SMART LRR_CC_2 95 127 IPR006553 -
Stsc244028g00001 389 SMART LRR_CC_2 49 81 IPR006553 -
Stsc244028g00001 389 SMART LRR_CC_2 141 173 IPR006553 -
Stsc244028g00001 389 SMART LRR_CC_2 187 219 IPR006553 -
Stsc244028g00001 389 SMART LRR_CC_2 3 35 IPR006553 -
Stsc244028g00001 389 SMART LRR_CC_2 279 311 IPR006553 -
Stsc244028g00001 389 Gene3D Ribonuclease Inhibitor 2 71 IPR032675 -
Stsc244028g00001 389 Gene3D Ribonuclease Inhibitor 215 347 IPR032675 -
Stsc244028g00001 389 MobiDBLite consensus disorder prediction 368 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc244028g00001 Stsc-Chr244028 5413 7954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc244028g00001 109 336 WRKY Transcription Factor Family AT5G45050 23.913 3.22e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc244028g00001 - - zju:107403345 250.366