Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243927g00002 ATGGCGGCAGGACTCTCCGCCGCAATATCCTGGAAGCCCCTCCTCCGTCCCCACCACCACCACCACCACCAACACCATCCCTTCTCTCCTCACAAGTCAATTATAATTCCCTCAACTCCTGCCTTCTTCGGAAGACACCAGAAACTCCATACAATGAAGTTCACAGCCTGCGTTCTCATGGAGGACCCCAAGAAGAATACCGCAAGCCACGTGGCGGATACCGAGAAGGAAGAAACGGTTGTTGTTTATCCTCATCTGGTGCCGCCACGTGTCACGGAGAGATTGGCCAGGAAGAAGTCGGAGAGATTGACGTATCTCGTTGCCGCCATGATGTCTAGCGTTGGCATCACTTCCATGGCTGTCTTCGCTGTTTATTACAGATTCGCATGGCAATTCCAGGGTGGAGAAATTCCATTGTCTGAAATGTTTGGCACATTTGCTCTATCCGTTGGTGCTGCTGTGGGTATGGAATTTTGGGCAAGATGGGCACACAGAGCTCTCTGGCATGCTTCCTTGTGGCACATGCATGAGTCACACCATAGACCAAGAGATGGACCCTTCGAAATGAACGATGTGTTTGCAATAATAAACGCTGTGCCTGCCATTGCTCTCCTCTCCTTTGGTTTCTTCCACAAGGGACTCCTCCCTGGCCTCTGCTTTGGTGCTGGTCTTGGGATCACAGTGTTTGGAATGGCTTACATGTTTGTGCACGATGGATTAGTTCACAGGAGATTCCCTGTAGGTCCCATTGCCAATGTTCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTTCACCATTCGGACAAATTCAATGGGGTGCCATATGGGCTTTTCTTGGGACCAAAGGAACTTGAAGAAGTGGGAGGGTTAGAAGAGCTTGAGAAAGAGATTAGTAGGAGAATAAAATCTTACAATAAAAATAGTTCATGA 933 0.4909 MAAGLSAAISWKPLLRPHHHHHHQHHPFSPHKSIIIPSTPAFFGRHQKLHTMKFTACVLMEDPKKNTASHVADTEKEETVVVYPHLVPPRVTERLARKKSERLTYLVAAMMSSVGITSMAVFAVYYRFAWQFQGGEIPLSEMFGTFALSVGAAVGMEFWARWAHRALWHASLWHMHESHHRPRDGPFEMNDVFAIINAVPAIALLSFGFFHKGLLPGLCFGAGLGITVFGMAYMFVHDGLVHRRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKELEEVGGLEELEKEISRRIKSYNKNSS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243927g00002 310 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 1 306 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243927g00002 Stsc-Chr243927 1428 4425 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243927g00002 1 222 Chloroplast and Mitochondria Gene Families AT4G25700 58.150 7.22e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243927g00002 K15746 - gmx:100785541 427.557