Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243889g00002 ATGACAGGGAAAGCGAAGCCAAAGAAGCACACGGCGAAAGAGATCGCGGCGAAGGTCGACGCCGCCACCACCAACCGTGGCGGAGGAAAGGCGGGTTTGGCGGACCGGTCGGGGATAGATAAGGGCGGTCACGCGAAGTTTGAGTGCCCGCTCTGCAAAGCTACGGCACCGGACATGAAATCGATGCAGATCCACCACGATGCGAAACATCCCAAGCTTCCGTTCGAAGAGGAGAAGATCGTCAACCTCCACGCCTCCCGCGTCGCCGAGTCCTCCAAGCCTAAACCCGGCGTCCGTGGAAGCCTAAAGAAATAG 315 0.5937 MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLADRSGIDKGGHAKFECPLCKATAPDMKSMQIHHDAKHPKLPFEEEKIVNLHASRVAESSKPKPGVRGSLKK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243889g00002 104 SUPERFAMILY Expressed protein At2g23090/F21P24.15 29 77 - -
Stsc243889g00002 104 PANTHER GEO09665P1-RELATED 1 79 IPR045230 -
Stsc243889g00002 104 MobiDBLite consensus disorder prediction 1 41 - -
Stsc243889g00002 104 MobiDBLite consensus disorder prediction 85 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243889g00002 Stsc-Chr243889 6834 7148 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243889g00002 1 104 C2H2 Transcription Factor Family AT3G02790 74.528 4.18e-52 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243889g00002 - - pvy:116132925 194.126