Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243857g00001 ATGGTGATTCCTGATGCTCTCAATTTTTGGGGATTGCAGGAACTGGAAAAGAAGAGGAAGGAGAACACGCATTTTTTGTACGAGGAAAAGAAACAGCTGAACAAGTTGAGGGTGAAAGTTGAGAAGGTTGCTGAGGAAAAGCTTGGCTCCCAACTTGATATATTTGCTCCAGTCAAGTACTGA 183 0.4262 MVIPDALNFWGLQELEKKRKENTHFLYEEKKQLNKLRVKVEKVAEEKLGSQLDIFAPVKY 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243857g00001 60 Gene3D - 12 59 - -
Stsc243857g00001 60 Coils Coil 26 46 - -
Stsc243857g00001 60 FunFam 60S ribosomal protein L13a 12 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243857g00001 Stsc-Chr243857 6508 7012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243857g00001 1 60 Cytoplasmic Ribosomal Protein Gene Family AT5G48760 55.952 2.31e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243857g00001 K02872 - ath:AT5G48760 79.3369