Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243835g00002 ATGGCTTTTCTCTTCTCTCTTTTGTTTTTCCAAATCCTCTCTTCCAAGAGAAACAAATCTCCATCATCATCAACTTTGAGTTACCCTCCAAGCCCACCATCACTTCCCATAATTGGCCATCTCCACCTTCTCAAACCCTTAATCCACCAAGCCTTCAAAGACCTCTCACAAAAATATGGACCCCTTATATTCCTTAGAATCGGTTCGGCTCGATTTGTGGTTGCTAATACTCCATCTTTAGCCCAAGAGTTTCTCAAAGTAAATGAGCTCACTTACTCTTCTCGTAAAATGAACATGGCTTCAAACATTGTTACTTACCATGATGCCACCTTTGCTTTTGCCCCATATGGCACCTATTGGAAGTTCATCAAAAAGCTCAGCACCACTGAGCTTTTGGGAAATCGAATGCTTTCGCAGTTTCTTCCCATTCGAACGAGGGAACTCCATGAGTTCATTCAATCTTTAGCTAAAAAATCAATAGCTAATGAGACTGTGAACTTAACCGAATCGCTTATGAAGCTCTCCAACAACATCATATCCCAAATGATGCTTGGCATCAAGAGTTCTGGGACACAAAGCCAAGCCGAAGAGGCTAGGGTTTTGGTTCGCGACGTGACTAAGATCATTGGAGGGTTTAACATTTCAGACTTTTTAGGGTTCCTTAAGGTGTTGGATTTGCAGGGTTTCAAGAAGAGGGCCATGAAGATACATGAGAGGTATGATGCATTATTAGAGAGGATTATCTCTGATCGTGAGAATTTAAGAAGGAAGATGAAGATTGTTATGAATAAGCAGGATTATGATGAAGGTGAAGATGATAAAGTGAAGGATTTTCTTGATATTTTGCTTGATGTTTCCGAGGACAAAGATTGTGAGGTTCAATTAACCAGAAATAATATCAAATCATTGATTCTGGATTACTTTACAGCAGCTACAGATACAACCGCAATCTCAGTGGAATGGGCAATAGCTGAACTGTTTAACAACCCAAGGGTGTTGAAGAAGGCTCGAGAGGAG 1017 0.4061 MAFLFSLLFFQILSSKRNKSPSSSTLSYPPSPPSLPIIGHLHLLKPLIHQAFKDLSQKYGPLIFLRIGSARFVVANTPSLAQEFLKVNELTYSSRKMNMASNIVTYHDATFAFAPYGTYWKFIKKLSTTELLGNRMLSQFLPIRTRELHEFIQSLAKKSIANETVNLTESLMKLSNNIISQMMLGIKSSGTQSQAEEARVLVRDVTKIIGGFNISDFLGFLKVLDLQGFKKRAMKIHERYDALLERIISDRENLRRKMKIVMNKQDYDEGEDDKVKDFLDILLDVSEDKDCEVQLTRNNIKSLILDYFTAATDTTAISVEWAIAELFNNPRVLKKAREE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243835g00002 339 Coils Coil 237 264 - -
Stsc243835g00002 339 Gene3D Cytochrome P450 13 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243835g00002 339 Pfam Cytochrome P450 29 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243835g00002 339 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243835g00002 339 PRINTS E-class P450 group I signature 319 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243835g00002 339 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243835g00002 339 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243835g00002 339 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 3 339 - -
Stsc243835g00002 339 SUPERFAMILY Cytochrome P450 29 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243835g00002 Stsc-Chr243835 3507 6216 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243835g00002 26 339 Cytochrome P450 AT5G06900 41.772 1.55e-83 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243835g00002 K23179 - gmx:100783503 473.396