Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243830g00001 ACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCAAGGAGAATTCGTCATAGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGATTATGGAACATGAAACTTCGTGGGGTGACAAACTTCTACCTATGTGAAATAAATCGAGATATGGTGATTGACGCAACATATAAAGGAAACAAATCAAGATATATCAATCATAGTTGCTCTCCTAATACTGAGATGCAGAAATGGATAATTGATGGTGAAACAAGGATTGGCATATTTGCGACACGCGACATACGGAAGGGTGAACATCTGACATATGATTATCAGTTTGTCCAGTTTGGCGCAGATCAGGATTGCCATTGCGGTGCTAATATGTGCAGGCGCAAGCTTGGTGTCAAGCCTACCAAGCCTAAAACTTCTTCAGATGCTGCATTAAATTTATTTGGAGATCAGGTTTATCAGAATGGAGATTTGCATATAGGAAATTCTCGCCTCTTTTGCCAATCAAAGTGCCTTCGCAATTGCATTGGTGAAGTTGTTAGAATCAGACACCTTGATATCGTGAGGTTTGGGATTATTAAACGGTTTCATGAATATTCGAAAAGACACTCGATCATGTTTGAGAATGGACATGTCGAAATTTTTGACATGTCCAAGGAAGATTGGGAACTGGTTACAGTGTGA 690 0.3928 TEKCGSGIVADEDIKQGEFVIEYVGEVIDDKTCEERLWNMKLRGVTNFYLCEINRDMVIDATYKGNKSRYINHSCSPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGADQDCHCGANMCRRKLGVKPTKPKTSSDAALNLFGDQVYQNGDLHIGNSRLFCQSKCLRNCIGEVVRIRHLDIVRFGIIKRFHEYSKRHSIMFENGHVEIFDMSKEDWELVTV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243830g00001 229 PANTHER SET DOMAIN PROTEINS 1 149 - -
Stsc243830g00001 229 ProSiteProfiles SET domain profile. 1 111 IPR001214 GO:0005515
Stsc243830g00001 229 SUPERFAMILY SET domain 1 129 IPR046341 -
Stsc243830g00001 229 CDD SET_ASHR3-like 1 133 - -
Stsc243830g00001 229 ProSiteProfiles Post-SET domain profile. 117 133 IPR003616 -
Stsc243830g00001 229 SMART set_7 1 117 IPR001214 GO:0005515
Stsc243830g00001 229 Gene3D SET domain 1 149 IPR046341 -
Stsc243830g00001 229 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 188 IPR025787 -
Stsc243830g00001 229 Pfam SET domain 5 110 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243830g00001 Stsc-Chr243830 759 4196 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243830g00001 1 129 C2H2 Transcription Factor Family AT2G23740 37.584 1.97e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Stsc243830g00001 SET 4.9e-22 No_clan