Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243824g00001 ATGGATTTGAAATCGGATCTTTCATGTGAATCAGAGAATACAGGACAGTTTTTATATGATATTGAGGACAAGTATGTGCCAAAGGTTGGCATGCTTTTCGAATCTCTTGAGGCGGCTAGGATTTTTTATAGGAATTATGCTAAACGCGCAAGCTTCTCTACAAAAATAAGGAACACAAATAAGAGTAAGAAATCAAATGAAATTCTAAATCAGCTTCTTTCATGTAATAGAGAGGGGAAAAGGAGGTCCGAGTTAGCAGTTTCAGAGAAGACAAATTCTATATTCGCTCCTAATTGTCCAGCGAGAGTCTACGTGCATCATTTGAAGATAATTGGGCTTTGGGAGATATCAAAGGTGGTTTTAGGACATTCACACCCTTCCTGTCCAAATCAAGCAGAATTGTTTCCCCAATACCGAGAGCTGAGCATGCATGTTCGTCGGACCATTGAGATCAACGATTAA 462 0.3918 MDLKSDLSCESENTGQFLYDIEDKYVPKVGMLFESLEAARIFYRNYAKRASFSTKIRNTNKSKKSNEILNQLLSCNREGKRRSELAVSEKTNSIFAPNCPARVYVHHLKIIGLWEISKVVLGHSHPSCPNQAELFPQYRELSMHVRRTIEIND 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243824g00001 153 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 9 153 - -
Stsc243824g00001 153 Pfam FAR1 DNA-binding domain 42 126 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243824g00001 Stsc-Chr243824 3932 5294 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc243824g00001 FAR1 1.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243824g00001 - K13993 adu:110280446 169.474