Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243823g00003 ATGCAGCTGAGGGAAAAAGTTGAGAGATTGATTCAAGATGCTAGAGATCATGAGTTTGAAGACAACAAGTTTCTTGAGATGGTTAAAGCAAGAAATGATTTGGATGATTATGTTTACAAAATGGTAAAGGCTTTAAGTTATATTGAAAATAAGAAGAACAGGAAAAAGATCATTCATGCAATTTTTAAGGCCAAGTTTTTGCTTATTGATGAAGATCAGCATACAAAAGATGTGTTGGTGAAGAGGCTGAAGAAGCTTGAGAAAGTTTTTGAGCCCATGATGCGAAAATTGGAAAAAGTAAACTAA 306 0.3333 MQLREKVERLIQDARDHEFEDNKFLEMVKARNDLDDYVYKMVKALSYIENKKNRKKIIHAIFKAKFLLIDEDQHTKDVLVKRLKKLEKVFEPMMRKLEKVN 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243823g00003 101 Gene3D - 3 99 IPR029048 -
Stsc243823g00003 101 Pfam Hsp70 protein 5 97 IPR013126 GO:0005524|GO:0140662
Stsc243823g00003 101 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 5 96 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243823g00003 Stsc-Chr243823 6972 7277 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243823g00003 4 97 Calmodulin-binding Proteins AT1G16030 26.263 3.10e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243823g00003 - K05973 aip:107640479 87.8113