Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243821g00003 ATGACGGATTGGCATTCAACTCCATTGGATTTGAATTCCATGCACGAGGAACCTCAATTGGAAGAGCAAACCGAGGTTTTGAAATCTATTGATGAGGTTGGGCAATTGGATGATCATTTTGAGGATCTGAATTCCATTGATCAGGTTGGGCAATTGGATGATCAAACAGAGTCTCTGTTTAATGTTGATGAAGAGCATGTCCCTAAGGTTGGGATGACATTTAAGTCATGTACAGAAGCTGGTGAATTCTACAAGGAGTATGCTAAACGAGCTGGATTTTCCTCCAAAATAAGAAATTCACAAAGAAATAAAAAGACCGGTGCAATCAAGAATCAACTCTTCACATGTAAGAGAGAGGGAAAAAGTAGATCTGACATTCCTGAGGCGGAAAAGACGAACCCCATGTCCCCGGCAAATTGTCCGACAAGGATGTTCGTTCATATCGATAAGTTGACTTAG 459 0.4096 MTDWHSTPLDLNSMHEEPQLEEQTEVLKSIDEVGQLDDHFEDLNSIDQVGQLDDQTESLFNVDEEHVPKVGMTFKSCTEAGEFYKEYAKRAGFSSKIRNSQRNKKTGAIKNQLFTCKREGKSRSDIPEAEKTNPMSPANCPTRMFVHIDKLT 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243821g00003 152 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 147 - -
Stsc243821g00003 152 Pfam FAR1 DNA-binding domain 82 147 IPR004330 -
Stsc243821g00003 152 MobiDBLite consensus disorder prediction 118 138 - -
Stsc243821g00003 152 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243821g00003 Stsc-Chr243821 6741 7663 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc243821g00003 FAR1 1.2e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243821g00003 - K17604 adu:110280446 105.531