Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243694g00002 ATGTCGCCGGAATTTCAGGCCACCGGCGTGGCGACGCAGAAGTCCGACGTGTACGCGTTCGGTGTGGTGATTCTGGAGCTTCTCTCCGGGGAGGAGCCGCTGAGATTCAGGTACGACAAGAAGAGTGGAGAGTTTGTGAGGACATCGGTGATCGACGCCGCGAGGGCTGCCGTGGACGGCGCTGAGGGGGCGCTGAGGAGGTGGGTGGATAGGAGGCTAAAGGACTCGTTCCCGGTTGAGGTTGCGGAGAAGGTGACACGTGTCGCATTGGATTGCGTACACGTGGACCCCGATAAGAGGCCCAAGATGGGTCGCGTAGCTGACAAGATATCCAAGCTGTATTTGGAATCAAAGATTTGGTCTGATAATGTTAGAATGCCCACTGAAATTTCTGTTTCTTTGGCTCCTCGATGA 414 0.558 MSPEFQATGVATQKSDVYAFGVVILELLSGEEPLRFRYDKKSGEFVRTSVIDAARAAVDGAEGALRRWVDRRLKDSFPVEVAEKVTRVALDCVHVDPDKRPKMGRVADKISKLYLESKIWSDNVRMPTEISVSLAPR 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243694g00002 137 Pfam Protein tyrosine and serine/threonine kinase 1 109 IPR001245 GO:0004672|GO:0006468
Stsc243694g00002 137 Gene3D Transferase(Phosphotransferase) domain 1 1 129 - -
Stsc243694g00002 137 ProSiteProfiles Protein kinase domain profile. 1 115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc243694g00002 137 SUPERFAMILY Protein kinase-like (PK-like) 1 112 IPR011009 -
Stsc243694g00002 137 PANTHER OS09G0572100 PROTEIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243694g00002 Stsc-Chr243694 7630 8043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243694g00002 1 130 Receptor kinase-like Gene Family AT1G21230 31.061 1.44e-15 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Stsc243694g00002 PK_Tyr_Ser-Thr 2.6e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243694g00002 - - cave:132164263 223.787