Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243689g00002 ATGGATGCTTTGTTGTTGAGCTCGAATCCAAAGCCATTTCAGTGCCTTCCATGCTTCTCAACCAAGCATCAAAGGCAGTATTCTCATATGAATCTTTCGTGCAGAGCCACAAAGGTGGAATGTGAGAGTAACTTCTACAAGGTTCTGAGTGTCAGTCCAAAGAGTGCAACAATGGATGAGATCAAGAGAGCTTATAGATCCATGGCGCTTCAATACCATCCAGATGTGTGCCATGATCCTTCCATGAAGGAGGAGTCAAACAGGATGTTTGTGCAGTTGAATGCAGCTTATGAGACCTTGTCCAACCCCATGCTTAAAGCACAGTATGATACTGAATTAGGTTTGAGAAATAATAATGAAGTGTTGATGAGTGTTAGCCATGATTCTGAAACTAGTTTGAGGAGTTTGTGGGAGAAGGAGGAACAGCAAGTGGTTGTTGAATTGAAGACAAGGTCTCGGAGACGCATGGAACAAAAGGGCAACAGAATGAGGACACAAACCAGCAGAGGAGAACACAGGAACTGA 525 0.4362 MDALLLSSNPKPFQCLPCFSTKHQRQYSHMNLSCRATKVECESNFYKVLSVSPKSATMDEIKRAYRSMALQYHPDVCHDPSMKEESNRMFVQLNAAYETLSNPMLKAQYDTELGLRNNNEVLMSVSHDSETSLRSLWEKEEQQVVVELKTRSRRRMEQKGNRMRTQTSRGEHRN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243689g00002 174 SUPERFAMILY Chaperone J-domain 32 109 IPR036869 -
Stsc243689g00002 174 Gene3D DnaJ domain 30 135 IPR036869 -
Stsc243689g00002 174 SMART dnaj_3 43 105 IPR001623 -
Stsc243689g00002 174 MobiDBLite consensus disorder prediction 151 174 - -
Stsc243689g00002 174 Pfam DnaJ domain 44 110 IPR001623 -
Stsc243689g00002 174 ProSitePatterns Nt-dnaJ domain signature. 90 109 IPR018253 -
Stsc243689g00002 174 PRINTS DnaJ domain signature 65 80 IPR001623 -
Stsc243689g00002 174 PRINTS DnaJ domain signature 47 65 IPR001623 -
Stsc243689g00002 174 PRINTS DnaJ domain signature 85 105 IPR001623 -
Stsc243689g00002 174 CDD DnaJ 44 102 IPR001623 -
Stsc243689g00002 174 ProSiteProfiles dnaJ domain profile. 44 113 IPR001623 -
Stsc243689g00002 174 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 25 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243689g00002 Stsc-Chr243689 3830 4354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243689g00002 46 111 C2H2 Transcription Factor Family AT1G74250 42.647 4.95e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243689g00002 - - aip:107631621 270.011