Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243682g00001 ATGGAAGAAGCAAGAAACTGGCTAATACCTACCTCAGTATTTATCCTCTTCTTCCTTCTTCATCTTTCTAAGTACATACTTCATCAGATCCATGGCAAACACAAAAAGCTACCACCAAGTCCACCATCTCTACCAATAATAGGTCACCTTCATCTCATCAAACAACCCTTACAACGAAGCTTTCACAGCCTCGCACAGAAATATGGGCACATGGTGTTCCTCAAACTTGGAACACGCAAGGTACTTGTTGTGTCTTCACCTGCAGCTGTTGAAGAATGTCTCACAAAGAGTAATGATATCATTTTTGCAAACCGTCCCAAAACACTTTCCTCCAAGAATCTCAACTACGATAGTAAGACAATCGGGTTTGCTTCCTACGGCGACCACTGGCGCAACCTCCGCCGTCTAACCACCTTGGAGCTCTTCTCTACCAATCGCCTTGCCATGTTAGAGAGTGTTCGTGAGGAAGAGGTTCAGTTTTTGGTGAAGCAACTCTTTCAAGAATGCAGCAACGCTGGTCAAACTCAAAAGTCAAAGGTAGAAGTGAGGCCAAAAATTGTGGGAGTTGCTTTCAACATGATGCTGAGGATGATATCCGGGAAAAGGTACTACGGTACGGATATTGATGAAGAAGGTAAAGAGTTCCAAACTCTTATGAAGGAGTTCACTGCGATTCAAGGTGCGAGCATTAATGACTTCATTCCAATACTGAAATTGATTGATTTTCAAGGCGTGGAAAAGAAAATGGTGGAGCTGATGAAAAGGGCGGATAGCTTTTTTCAGAAACTAATTGATGAGCACCGAAGGAATTATGAAAGCGTGAGTAATGAAAGTAAAATGAAGAAGAATATGATTGATGTCATGTTGGAATTGCAACAGAAGGAACCCCAATTCTACACGGATGAAACTGTCAAAGGAGTCATTCTGGCAATGCTGATAGCAGGGTCAGAAACCTCTGCTATTACAATGGAATGGGCAGTGTCACTTCTCCTCAACAATCCTCAAAAGATGAAGAAGCTTCAACATGAGATAGAAACACATGCAGGGCATGATCAACTCTTGAATGAATCAAACGCGGCCAAAATCAAGTACCTTCAGAATGTAATCACTGAGACACTTCGAATATACCCTGTGGCACCACTTCTCATACCTCACGAGTCTTCAACTGATTGCAAAGTTTGTTGCTATGATATACCAAAAGGAACAATGCTGTTTGTGAACTTGTGGACACTGCAAAGGGACCCTAATTTGTGGACAAATCCTTTGGAATTCGTTCCAGAAAGATTTGAGGGAGGTGATGATGGTGGTGGTGAAGTTTGTTACAATATGATTCCATTTGGTGCTGGAAGAAGAGCATGCCCTGGAGCTGGTTTGGCAAAACGTGTTATGGGGCATGTATTGGGAGCATTGATTCAATGTTTTGATTGGGAGAAAATTGAGGATGGAGAAGTGGACATGACAGAGGGAATAGGGCTGTCGTTGCCCAAAGCTGAACCCTTGGTTGCTTTTTGCAAGCCACGTCAAGAAATGATCAACATTCTATCTGATATATAA 1554 0.4241 MEEARNWLIPTSVFILFFLLHLSKYILHQIHGKHKKLPPSPPSLPIIGHLHLIKQPLQRSFHSLAQKYGHMVFLKLGTRKVLVVSSPAAVEECLTKSNDIIFANRPKTLSSKNLNYDSKTIGFASYGDHWRNLRRLTTLELFSTNRLAMLESVREEEVQFLVKQLFQECSNAGQTQKSKVEVRPKIVGVAFNMMLRMISGKRYYGTDIDEEGKEFQTLMKEFTAIQGASINDFIPILKLIDFQGVEKKMVELMKRADSFFQKLIDEHRRNYESVSNESKMKKNMIDVMLELQQKEPQFYTDETVKGVILAMLIAGSETSAITMEWAVSLLLNNPQKMKKLQHEIETHAGHDQLLNESNAAKIKYLQNVITETLRIYPVAPLLIPHESSTDCKVCCYDIPKGTMLFVNLWTLQRDPNLWTNPLEFVPERFEGGDDGGGEVCYNMIPFGAGRRACPGAGLAKRVMGHVLGALIQCFDWEKIEDGEVDMTEGIGLSLPKAEPLVAFCKPRQEMINILSDI 517
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc243682g00001 517 SUPERFAMILY Cytochrome P450 38 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 FunFam Cytochrome P450 family protein 29 510 - -
Stsc243682g00001 517 CDD CYP81 69 500 - -
Stsc243682g00001 517 Gene3D Cytochrome P450 30 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc243682g00001 517 PANTHER CYTOCHROME P450 82C3-RELATED 15 508 - -
Stsc243682g00001 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Stsc243682g00001 517 Pfam Cytochrome P450 38 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc243682g00001 Stsc-Chr243682 4060 8995 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243682g00001 16 505 Cytochrome P450 AT5G67310 43.636 8.46e-155 449
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243682g00001 - - gmx:100794610 640.573