Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243655g00001 TGGGTTCTACACGATTGGAATGATGAAGATTGCATCAAAATTTTAAAAAGTTGCAAAAAATCTATATCAAAAAAAGGAAAAGTGATTATCATTGACGTAGTTATAAATAATGAAGAGCAAGATGAGGAGGACGAAACGACCCAATTAAAACTTCTTTCGGATATAAACATGGCAGCTATATTTGGTGCAAAAGAACGAAGTGAGAAAGAATGGAAACAACTCTTCATAAAAGCTGGATTCAACAATTACAAAATATTTCCGATATTTGGTTTTAGATCTCTTATAGAAGTCTATCCTTAG 300 0.3167 WVLHDWNDEDCIKILKSCKKSISKKGKVIIIDVVINNEEQDEEDETTQLKLLSDINMAAIFGAKERSEKEWKQLFIKAGFNNYKIFPIFGFRSLIEVYP 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243655g00001 99 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 99 IPR016461 GO:0008168
Stsc243655g00001 99 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 98 IPR029063 -
Stsc243655g00001 99 PANTHER O-METHYLTRANSFERASE 1 84 IPR016461 GO:0008168
Stsc243655g00001 99 Pfam O-methyltransferase domain 1 81 IPR001077 GO:0008171
Stsc243655g00001 99 Gene3D Vaccinia Virus protein VP39 1 99 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243655g00001 Stsc-Chr243655 7346 7645 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243655g00001 1 99 Monolignol Biosynthesis Gene Families AT1G51990 43.137 4.60e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243655g00001 - K22588 gmx:100819257 97.0561