Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243540g00001 ATGAAGCTAGGAAATGGGAAAGCCTTATCTGCAGAGGATTCCGATGACGAAGGCAAATTCGAAGACAATGGTGATGATTGCTTCGAAGATGGTGGCGGTGCTCGACGGCGGCGAGGAAGCTTCTTCTTCCTCGAGCTCTCCCTCGAGTCTCTCTCTCTCCTCCACGGATGCTATGGCGGTTCAACCCAGCGCTACAAAGCAATATACAGCTTCGGAGACTCCCTCGCTGACGCCGGAAACTTGTTATATGACACTGAAAACCTTACGGCAGCACACAATAGTTCATCTTTACACCTTCCATATGGAGAAACTTATTTTCAAAACCCAACCGGAAGGTTCTCCGATGGCCGTCTTATTGTTGATTTCATTTGTAAGAACAAAACCATGTCCCCTTCCCACTCCTCTGATCTTCTTATTTGTTTCTTTGCTTATTCATATTCATAG 444 0.464 MKLGNGKALSAEDSDDEGKFEDNGDDCFEDGGGARRRRGSFFFLELSLESLSLLHGCYGGSTQRYKAIYSFGDSLADAGNLLYDTENLTAAHNSSSLHLPYGETYFQNPTGRFSDGRLIVDFICKNKTMSPSHSSDLLICFFAYSYS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243540g00001 147 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 53 126 - -
Stsc243540g00001 147 Pfam GDSL-like Lipase/Acylhydrolase 68 130 IPR001087 GO:0016788
Stsc243540g00001 147 Gene3D SGNH hydrolase 59 142 IPR036514 -
Stsc243540g00001 147 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243540g00001 Stsc-Chr243540 1358 5779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243540g00001 38 134 Pollen Coat Proteome AT1G75930 32.673 5.30e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243540g00001 - - pda:103723139 80.4925