Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243486g00001 ATGGGTGATGCAATTGATTTGACTGGTGATGGAGGAGTCACTAAAACCATTTTGACAAAAAGCAAGCTGGATGCTGTGGCTCCAACAGAAGATTTTCCTCTTGTTGATGTGCATTATGAAGGCAAACTTGCTGATACTGGTGAAGTGTTTGACACTACACATGAAGACAACTCTATCTTCACTTTTGAGATAGGAAATGGTAGTGTTATCAAGGCTTGGGACATTGCAGTGAGGACCATGAAGGTTGGAGAAATTGCAAGAATAACATGCAAGCCAGAGTATGCGTATGGTAGTGCAGGAGCACCACCAGAGATTCCCCCAGATGCAACACTTATCTTTGAAGTTGAGCTAGTTGCCTGTCGACCCCGAAAGGGTTCAAGCCTCGGAAGTGTTTCAGAGGAGAGGGCTAGGCTAGAAGAGCTAAAGAAGCAAAGAGAAATGGCGGCTGCTGTGAAAGAGGAGGAGAAGAAGAAGAGAGAAGAAGCAAAAGCTGCCGCTGCTGCTCGTGTGCAAGCCAAGTTAGAAGCCAAGAAAGGAAAGGGCAAAGGAAAAGGAAAATAG 561 0.4545 MGDAIDLTGDGGVTKTILTKSKLDAVAPTEDFPLVDVHYEGKLADTGEVFDTTHEDNSIFTFEIGNGSVIKAWDIAVRTMKVGEIARITCKPEYAYGSAGAPPEIPPDATLIFEVELVACRPRKGSSLGSVSEERARLEELKKQREMAAAVKEEEKKKREEAKAAAAARVQAKLEAKKGKGKGKGK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243486g00001 186 MobiDBLite consensus disorder prediction 150 186 - -
Stsc243486g00001 186 Gene3D - 2 120 IPR046357 GO:0003755
Stsc243486g00001 186 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Stsc243486g00001 186 MobiDBLite consensus disorder prediction 150 166 - -
Stsc243486g00001 186 Coils Coil 131 165 - -
Stsc243486g00001 186 SUPERFAMILY FKBP-like 8 124 - -
Stsc243486g00001 186 FunFam Peptidyl-prolyl cis-trans isomerase 7 122 - -
Stsc243486g00001 186 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
Stsc243486g00001 186 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243486g00001 Stsc-Chr243486 3021 5901 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243486g00001 4 146 Calmodulin-binding Proteins AT5G48570 35.135 7.78e-13 64.3