Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243403g00001 ATGGCTGCTGCTGCCTACGATGTTGCTGCTCTTGCCTTGAAGGGTCCCGATGCGCTTCTCAACTTCCCCAATTCCATACTCTCTTACCCTATCCCTGCCTCATTGTCTCCTCCTGATATTCGCGCCGCAGCCGCCGCAGCCGCTCAGGCTAGGCTTCCGAGGCCACCGCAGAATCCTCCAGCAGAGGGTGGCAGTGCTAGTGCTGCTAGGGATGACGGTGGCAGTGGTAACGTTATTGCTGAAGAGTCTTATTCCTGTTTGAGTGGCGAACAAGGAGGGATGAATATGGTTGGTGAGTACATTGATGAGGATGAACTTCTGAACATGCCGAGTGTGATTGAAGACATGGCCAGGGGAATGCAGGTTAGCCCTCCAAGGATGCACTCTTTCTCCTCCGATGACTCCCCTGGGAATTCCGATTTAGATACCCTTTGGAGTTTTTGA 444 0.5315 MAAAAYDVAALALKGPDALLNFPNSILSYPIPASLSPPDIRAAAAAAAQARLPRPPQNPPAEGGSASAARDDGGSGNVIAEESYSCLSGEQGGMNMVGEYIDEDELLNMPSVIEDMARGMQVSPPRMHSFSSDDSPGNSDLDTLWSF 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243403g00001 147 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 1 146 IPR045277 GO:0003700
Stsc243403g00001 147 MobiDBLite consensus disorder prediction 125 147 - -
Stsc243403g00001 147 MobiDBLite consensus disorder prediction 44 91 - -
Stsc243403g00001 147 MobiDBLite consensus disorder prediction 122 147 - -
Stsc243403g00001 147 ProSiteProfiles AP2/ERF domain profile. 1 23 IPR001471 GO:0003700|GO:0006355
Stsc243403g00001 147 Gene3D AP2/ERF domain 1 25 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243403g00001 Stsc-Chr243403 11121 11564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243403g00001 13 147 AP2-EREBP Transcription Factor Family AT5G52020 39.860 4.34e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243403g00001 - - gmx:100776717 146.747