Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243395g00001 ATGCAGAACAATGAGTACAACAACAAAGAAGAAGTTGAACGCATCGCAGAGAAGCTGCTTCAACAGAACTGCGATCTCAACGGCGCCAAAAACTTCGCCATCCTAGCCCAAGAAACAGAGCCCCTTCTAGAAACCCCCGACCAAATCCTCGCCGACGTCCTCCTCGTCTCCGACGCCACCACCGTCGATAGCACCCTGCAATGGTACCAAATCCTCCAAGTCGACGTATCACACTCTCAAGACCTCCACGTCATCAGGTCCAACTACCGCAGGCTCGCCCTCCTCTTCCTCCACCCTGACAAGAACCGGTTCCCCTTCGCCCAACATGCATTCGCCCTCGTTTCCTACTAG 351 0.5442 MQNNEYNNKEEVERIAEKLLQQNCDLNGAKNFAILAQETEPLLETPDQILADVLLVSDATTVDSTLQWYQILQVDVSHSQDLHVIRSNYRRLALLFLHPDKNRFPFAQHAFALVSY 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243395g00001 116 CDD DnaJ 68 115 IPR001623 -
Stsc243395g00001 116 ProSiteProfiles dnaJ domain profile. 67 116 IPR001623 -
Stsc243395g00001 116 Gene3D DnaJ domain 55 116 IPR036869 -
Stsc243395g00001 116 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 8 115 - -
Stsc243395g00001 116 Pfam DnaJ domain 68 115 IPR001623 -
Stsc243395g00001 116 SUPERFAMILY Chaperone J-domain 60 115 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243395g00001 Stsc-Chr243395 3474 3824 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243395g00001 8 114 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 58.261 3.20e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243395g00001 - - ahf:112706243 179.874