Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243380g00005 ATGGAGTTGGAAATCATTGAGCGATGTTCAATTTCACCTCCACCCAGTTCCGTTCCACCAACATCAATTCCTCTAACATTCTTGGACCTCCCATGGTTCCTCCTCCCTCCGCTGCAACGCATCTTCTTCTACAAGCTTCCTCAACCCAACCAAATCTTACAAAGTGTGGTTCCCACTCTCAAACACTCTCTTTCACTCACTCTTCAACACTTCTATCCCTTTGCCGGAAACATTGTTGTGCCTCCTCAGCCCAATAACATATTACCTCACATCCTCTACTCCAACGGCGACTCTGTTCCTTTCACTGTGGCCGAGTCCAATCAAGATTTTAAGTCCTTCGTCGATCATGCTCCAACAGATCTTAGAGACATCAACCTTCTTGTTCCGGTGTTTCCTTCTCCGCGTACAACGCAAGACGGTGCAAAGTTGCTTCCTCTTCTGGCGGTTCAGATCACTGTACTTCCCAACTATGGCTTCAGCGTGTGCATCGCCTTTAATCACGTTGTTGCTGACGGAAGAGCGTTGCATCATTTCATCAAGTTCTGGGCTTCTGTTTGTAAGTCCAGAGGTGAAGACATGGATTCCATTCAAGAATCTCTCCAACTGCCACTGCACAACAGAGACGCCATTATCAAAGACTCGAAAGGGCTAAAGTTCGTTTTCTTGGAGGAACTTTCGAGTTCTTTTCCAAAGATCGGGGAATCTTTTGGCACACCTGTTGATGCTCCTGGTGACAAGGCTTGCATCACGTTTTCACTCCGCCGTGAGCATGTGGAGAAAATCAAGAAATGGATAGCCCTTGAATGCAAGACAATCGGTCTAAAGACAGAGTCATTGCGCATATCGACCTATGTGGTGACTTGTTCTTTGCTTTGGGTTTGCCTGGTAAAATATTATTACACAAACACTGATGATGTTGTTAACAAGGTTAGTCATGAAACATGCAAGTTTATATTCCCAGCAGATTGTCGAAACTGTCAAGAATTGTCTATTCCATCCACATACTTTGGAAACTGCATTAATCGGACGGTGGTTGAACTCGAGAAGAGCAAGCTAGTGGGGGAAAATGGGATTGTTGAAGCAGCTATTGCTATTGAAGACATAATTAGAGAGTTTAAGTGTGACGGTTTTAAAGGGATTGAAAATTTGGTGTCACATTCGAAGGAGTTCAGAAAACCAGAAGGATGTAAAATAATAGCTTCAGGGTCTGCAAAGCATGGTGTTTATGAAAGTGATTTTGGGTGGGGAAAGCCCAAGAAAAGTGATGCAGTTCATGTAATGCCTTCAAAGATATTCACTCTTTGTGATTCTAAGGATGATAATGGTGGAGTTGAAATTGGACTCACCCTTGAAAGGAATCAAATCGAAAATTTTAATACTATTATGAAAGAACACATTAGAAGTATTATTGGTTGTGATTAG 1422 0.4283 MELEIIERCSISPPPSSVPPTSIPLTFLDLPWFLLPPLQRIFFYKLPQPNQILQSVVPTLKHSLSLTLQHFYPFAGNIVVPPQPNNILPHILYSNGDSVPFTVAESNQDFKSFVDHAPTDLRDINLLVPVFPSPRTTQDGAKLLPLLAVQITVLPNYGFSVCIAFNHVVADGRALHHFIKFWASVCKSRGEDMDSIQESLQLPLHNRDAIIKDSKGLKFVFLEELSSSFPKIGESFGTPVDAPGDKACITFSLRREHVEKIKKWIALECKTIGLKTESLRISTYVVTCSLLWVCLVKYYYTNTDDVVNKVSHETCKFIFPADCRNCQELSIPSTYFGNCINRTVVELEKSKLVGENGIVEAAIAIEDIIREFKCDGFKGIENLVSHSKEFRKPEGCKIIASGSAKHGVYESDFGWGKPKKSDAVHVMPSKIFTLCDSKDDNGGVEIGLTLERNQIENFNTIMKEHIRSIIGCD 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243380g00005 473 PANTHER - 3 467 - -
Stsc243380g00005 473 Gene3D - 243 469 IPR023213 -
Stsc243380g00005 473 Gene3D - 1 230 IPR023213 -
Stsc243380g00005 473 Pfam Transferase family 2 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243380g00005 Stsc-Chr243380 9041 11311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243380g00005 6 464 Monolignol Biosynthesis Gene Families AT5G48930 21.019 3.84e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243380g00005 - - gmx:100797294 445.277