Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243369g00001 ATGCCAACAAACTCACACTCTCAGTCACAGCAACAGTTTCACGCCTTCTACGAAGAATGGCTCCAACGCCAACAAACTCTCCTCAACGACCTTCTCATACTCTCCAACGCTCCCCACTCTCAACAAAAACACAACCACACCACTTTAATCGAAACCGTTCTCTCCCACTACCAACAATACTTCGACCACAAAAAACGCCTCCAAAACGACGACGTTTTGCTCCTCTTCTCTCCCACCTGGCTCTCCACCTACGAGCGAGCACTTCTCTGGATCGGAGACTACAAGCCATCGCTAATCCTCCGCATCGCCGATGCCGCTCTCCACGACCTCACGTCGGACCAGATCCATGCGATTGAGAGGATCAGGGCGGAGACAAGGAGAGGGGAGAGGGAGCTTTCCGGTGCAATGGCGGGGGTTCAGGAGTCCGTGGCTAGTCCGCGCGTGTTGCAACGCGCTAGGAGAGTCGGTAGGTTGTTGAATGGCGAGATTGATGAGCTTGATGAGGCTATGGCGGGGCTGAGAAATGCAGTCGAAGAGGTTTTTCAGAGAGGGGATGAACTCAGGGTGGCTACGGTTAGGAACGTGGTGGCGATTCTCTCGCCACCGCAGACGGTTAGCTTCCTTGCGGCGGCGTTGGGGTTTCAGTTACGTGTCAGGCGGTGGGGGTTGGAAAGGGACC 679 0.5523 MPTNSHSQSQQQFHAFYEEWLQRQQTLLNDLLILSNAPHSQQKHNHTTLIETVLSHYQQYFDHKKRLQNDDVLLLFSPTWLSTYERALLWIGDYKPSLILRIADAALHDLTSDQIHAIERIRAETRRGERELSGAMAGVQESVASPRVLQRARRVGRLLNGEIDELDEAMAGLRNAVEEVFQRGDELRVATVRNVVAILSPPQTVSFLAAALGFQLRVRRWGLERD 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243369g00001 226 Coils Coil 163 183 - -
Stsc243369g00001 226 ProSiteProfiles DOG1 domain profile. 10 226 IPR025422 GO:0006351|GO:0043565
Stsc243369g00001 226 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 12 226 - -
Stsc243369g00001 226 Pfam Seed dormancy control 35 102 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243369g00001 Stsc-Chr243369 8219 8945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243369g00001 13 219 bZIP Transcription Factor Family AT5G06950 24.038 7.55e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243369g00001 - - aprc:113865861 241.121