Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243359g00001 ATGGCAGAGTCAGGGAGGTATTATTGTTACAGGGAAGTGCTTCCATTCTGTGCAATGGTTGCAGTTGAGTGTACCGGCGTCGGTGTCAACATTCTATTCAAACAAGCCACTCTCCAGGGATTGAGTTACTATGCTTTCATCGTTTATTCTTTTGCTGTCTCCACCCTTTTTCTTCTTTTGCCTCTCCCCTTCCTCCTCAGATGGTCAAGAGGGCTTCCTCCATTCACGGTTTCTCTGATCTTAAGAATTTTTCTCCTTGGTACGATTGGATTTGTAGCTCAGCTTAGTGGATACAAAGGACTTGAATACACTTCACCAACTCTATTCTCTGCTCTTAGCAACCTTATTCCGGCTTTTACCTTCATCCTTGCGGTATTTTTCAGG 384 0.4401 MAESGRYYCYREVLPFCAMVAVECTGVGVNILFKQATLQGLSYYAFIVYSFAVSTLFLLLPLPFLLRWSRGLPPFTVSLILRIFLLGTIGFVAQLSGYKGLEYTSPTLFSALSNLIPAFTFILAVFFR 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243359g00001 128 PANTHER WAT1-RELATED PROTEIN 14 125 IPR030184 GO:0016020|GO:0022857
Stsc243359g00001 128 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 127 - -
Stsc243359g00001 128 Pfam EamA-like transporter family 25 127 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243359g00001 Stsc-Chr243359 2854 3625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243359g00001 1 128 Nodulin-like Gene Family AT5G40240 56.391 3.22e-39 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243359g00001 - - adu:110281390 226.098