Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243344g00002 CAAGATAAACCATTAAAAATGGGTTTATCAGTCGTTGATAATGCTATTGAATGGGTTGAAGGGAATCAGTTAGCTGAGGTGGATGAATTTGAAAATAAGTTGAAGGAGTTGAAAGGTTTTTGTAAGCTAATTATTGCTAAGATGTATCAAGATGGTGATAGTGATGTGCTAGTCGGAGGTGATGCAAATGGTGCATCTTTTGGAAATTCTTCATTTGGTGACAATAATGGTGCTGGTTCTAAGATTGAAGAAGTTCATTAA 261 0.3525 QDKPLKMGLSVVDNAIEWVEGNQLAEVDEFENKLKELKGFCKLIIAKMYQDGDSDVLVGGDANGASFGNSSFGDNNGAGSKIEEVH 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243344g00002 86 MobiDBLite consensus disorder prediction 66 86 - -
Stsc243344g00002 86 Gene3D - 3 86 IPR029048 -
Stsc243344g00002 86 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 10 53 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243344g00002 Stsc-Chr243344 10620 10882 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243344g00002 12 85 Calmodulin-binding Proteins AT1G16030 54.667 1.73e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243344g00002 K03283 - qsa:O6P43_027960 89.3521