Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243332g00002 ATGAAGAAAGGTTTTGGAAAGGATTGCTTGAAAGTAGGTGTATTATTTGTATGGTTAATTTTGGTGACGAGTCCAACGTCAGTTGTGGGCGATCATCAGTGCACGTGCGAAGAGGAGGAGGAGAGTGAAGGTGGTGAGGAAGCAGCATCATTAGCTCTGAAATACAAAATAGCAGCTTTGGCTTCAATTCTGGTGGCAGGTGCAATGGGTGTTAGCATTCCAATGCTGGGGAAAAGCAAAAGCTTCTCTGCGTTGAGTCCAGAAAGGGATTTGTTCTTCATAATAAAGGCGTTCGCAGCAGGGGTGATATTGTCCACTGCTTTTATACACGTGTTGCCCGATGCTTTTGAGAAGCTAACATCCCCCTGCCTCAAGGAGCATCCGTGGGGAGATTTTCCTTTCACGGGTTTCGTGGCCATGATATCCGCTATTGGTACCCTCATGGTTGATTCTCTAGCAACTGCTTATTTTGATTACAATAATAATAATAATGTCCACCGTCAAGAGAACATGGAAGAGGGAGCAGTAGATCATCATGTGCATCTTCATGCACATGCTTCCACTAGTACTTCTTCCTCACACTCCACACAACTCCTTCGTCATCGTGTTATTTCTCAGGTGTTAGAGATAGGAATTGTGGTTCACTCTGTGATAATTGGGATCTCGTTGGGAGCATGTGAGAATGCAAAGACCATAAAGCCTCTAATTGCTGCATTAACTTTCCATCAATTCTTTGAAGGCATGGGCCTTGGTGGCTGCATCTCGCAGGCAAAATTCAAGAGAAGAGCAGTTGTAACAATGGCACTGTTCTTTACATTGACGACACCGGTTGGAATAGCGATTGGGATAGGGATTACCAAGGCATACAAGGAGAACAGCCCAAGAGCACTCATTGTGGAAGGGGTCCTGAACGCAGCATCTTCTGGAATATTAATTTACATGTCTCTAGTGGACCTCCTCGCACCAGATTTCATCAACTCGAGACTCCAACACAGTGGCCGCCTCCTTCAGTTTGGAGCTTATGCTTCTCTTCTACTTGGAGCTGCTTCCATGTCTGTTCTAGCTAAATGGGCTTAA 1077 0.4522 MKKGFGKDCLKVGVLFVWLILVTSPTSVVGDHQCTCEEEEESEGGEEAASLALKYKIAALASILVAGAMGVSIPMLGKSKSFSALSPERDLFFIIKAFAAGVILSTAFIHVLPDAFEKLTSPCLKEHPWGDFPFTGFVAMISAIGTLMVDSLATAYFDYNNNNNVHRQENMEEGAVDHHVHLHAHASTSTSSSHSTQLLRHRVISQVLEIGIVVHSVIIGISLGACENAKTIKPLIAALTFHQFFEGMGLGGCISQAKFKRRAVVTMALFFTLTTPVGIAIGIGITKAYKENSPRALIVEGVLNAASSGILIYMSLVDLLAPDFINSRLQHSGRLLQFGAYASLLLGAASMSVLAKWA 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243332g00002 358 PANTHER ZINC/IRON TRANSPORTER 52 352 - -
Stsc243332g00002 358 Pfam ZIP Zinc transporter 54 355 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc243332g00002 358 NCBIfam ZIP zinc/iron transport family 39 358 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243332g00002 Stsc-Chr243332 4804 6013 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243332g00002 14 358 Inorganic Solute Cotransporters AT3G12750 53.846 5.81e-124 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243332g00002 K14709 - qsa:O6P43_020675 409.068