Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243314g00002 ATGGGAGAACTGCCAAAGACTACAACATATGTTCCTGAAGATCATCACCACAACATATTGGAGGCTGCTATTGGAGACAAGAAGTTAGCTAGAGAAACCAAAATACATAGTTATGGAAAGAGTTTCAATGGATTTGTTGCAAGACTTTTGCCACATGAAGCAGAAAAATTACAAGGGGAGGACAATGTAGTGTCTGTGTTTCCAAATAAAATTAATAAATTGCATACAACAAGGTCATGGGATTTTCTGGGAATGCCAATAAAAGTAAAGAGAAACCACAATGTAGAGCATAATATCATTGTTGGTGTTCTAGACACAGGAATTGCACTTGATTGCCCCAGTTTCAATGATAAGGGGTTTGGGCCTGTCCCAAGCTCATGGAAGGGTAAATGTGTCAAATCAGCTAATTTCACAGGCTGCAACAACAAAGTGATAGGAGCAAAATTCTTCTACTTAGACCGAAACGATTACATGGACATAAATCTTAGCCCTATGGACGTAGAAGGCCACGGCACGCACACGGCGTCCACGGCCGCAGGCGCGAGCGTCCGGGGAGCTAGTGTCTCGGGGATCGGGCGAGGCACGTCCCGAGGCGGGGCCCCGGACGCTCGCATAGCGGTGTACAAAGTGTGTTGGAACAGCGGATGCAGTGACATGGACTTGATGGCAGGATTTGATGACGCAATTGCTGACGGTGTGAACTTCATATCTGTGTCTCTTGGAGGGACTCCAAGGGAGTTCTTCAGTGATCCAATGGCGATTGGAGCATTCCATGCAATGAAGAGAGGGATCTTAACAACGTGTTCTGGTGGGAACAGTGGTCCTCAGTTTGCAACTATTGAGAATGTTGCTCCATGGATTTTTACTGTGGCTGCTTCTTCTACTGATAGACAGTATGTAACTCCAATAGGCCTTGGTAATGGAAAAAATGCCACAGGAATGTCTATAAACACTTTCTCCCTTGAGAAAAAGATGTATCCATTGATAAGTGGAGACCTTGCCATAAATGCTTCAAGGGATGGCTATGGCAATGCCAGTTCTTGTGCTTATGGGACTCTAAGCAAAGACAAAGTGAAGGGAAAGATTGTGTATTGCCTTGGAAACACTGGGAATCAAGACTTAATCATAAAACAATTAGAGGGAGCTGGTTTTATATCTGCTTCTGAAGTGAAAACAGATTATTCCTCAGTCACAGTTATTGCTGCTTCCATTGTTGATGCCTACACTGTAGGGAAAAAAATTGCTCACTACATCAATTCCACCAAGAACCCTGAAGCTGTCATATACAAGACCAAAAGCAAAAGAGGCCAAGCTCCATACATTGCTTCTTTCTCATCTAGAGGACCTGAGTTCATCACCTCCAAAATCCTCAAGCCTGATTTGGCTGCTCCAGGAGTTAACATTCTAGCTGGTTATTCAAAAATGGCAACAATATCCGGTTACCCCGAACCGAATGATAACCGTTTCGAATCATTCAATATAGTATCAGGAACTTCTATGGCTTGTCCTCATGTTGCCGGCGCCGCGGCCTATGTGAAATCCTTCCACCCTGAATGGTCTCCTGCTGCAGTCAAGTCTGCTCTCATGACCACTGCTGTTCCCATGAAAGACAATGCAGCTGAGTTAGGAACTGGTTCAGGAAGGGTCAACCCTATAGCAGCATTGAACCCAGGCTTAATCTATGACATGAATTTGGACTCTTACATTGCTTTCTTATGCAATGAAGGTTACAACAGCACAAGCATTGGTATACTAATTGGAAGCAAAGGCTTTGATTGTTCCACCATTAATAAACCTCCACAAGGAAGTGATGGACTCAACTACCCTTCAATGCATATGCAGGTTCCTCCCAATTCCACCATCTCAGCAACATTTTACAGGACTGTGACTAATGTTGGAACTGGAAACTCAACTTATAAGGCTAAGGTTAAAGCACCTAAGAGTATTTCAGTTGAGGTTGAACCAAGTACATTGCAATTTAGTAAGTTGAACCAAGAGTTGTCCTTTAAGGTTGTCATAAAGGGTCCTCAATTTCCAAAAGGGAAAATGGTGTTATCAGCATCACTTGAATGGAGTGATTCTAAACACAAAGTTAGAAGCCCTATACTTGTCTATAATAAAGTAAGTGTGTACTGA 2136 0.4316 MGELPKTTTYVPEDHHHNILEAAIGDKKLARETKIHSYGKSFNGFVARLLPHEAEKLQGEDNVVSVFPNKINKLHTTRSWDFLGMPIKVKRNHNVEHNIIVGVLDTGIALDCPSFNDKGFGPVPSSWKGKCVKSANFTGCNNKVIGAKFFYLDRNDYMDINLSPMDVEGHGTHTASTAAGASVRGASVSGIGRGTSRGGAPDARIAVYKVCWNSGCSDMDLMAGFDDAIADGVNFISVSLGGTPREFFSDPMAIGAFHAMKRGILTTCSGGNSGPQFATIENVAPWIFTVAASSTDRQYVTPIGLGNGKNATGMSINTFSLEKKMYPLISGDLAINASRDGYGNASSCAYGTLSKDKVKGKIVYCLGNTGNQDLIIKQLEGAGFISASEVKTDYSSVTVIAASIVDAYTVGKKIAHYINSTKNPEAVIYKTKSKRGQAPYIASFSSRGPEFITSKILKPDLAAPGVNILAGYSKMATISGYPEPNDNRFESFNIVSGTSMACPHVAGAAAYVKSFHPEWSPAAVKSALMTTAVPMKDNAAELGTGSGRVNPIAALNPGLIYDMNLDSYIAFLCNEGYNSTSIGILIGSKGFDCSTINKPPQGSDGLNYPSMHMQVPPNSTISATFYRTVTNVGTGNSTYKAKVKAPKSISVEVEPSTLQFSKLNQELSFKVVIKGPQFPKGKMVLSASLEWSDSKHKVRSPILVYNKVSVY 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243314g00002 711 SUPERFAMILY Subtilisin-like 96 559 IPR036852 GO:0004252|GO:0006508
Stsc243314g00002 711 FunFam Subtilisin-like protease SBT1.5 572 707 - -
Stsc243314g00002 711 ProSitePatterns Serine proteases, subtilase family, serine active site. 497 507 IPR023828 -
Stsc243314g00002 711 Pfam Peptidase inhibitor I9 15 75 IPR010259 -
Stsc243314g00002 711 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 75 IPR037045 -
Stsc243314g00002 711 PRINTS Subtilisin serine protease family (S8) signature 166 179 IPR015500 -
Stsc243314g00002 711 PRINTS Subtilisin serine protease family (S8) signature 96 115 IPR015500 -
Stsc243314g00002 711 PRINTS Subtilisin serine protease family (S8) signature 496 512 IPR015500 -
Stsc243314g00002 711 Pfam Subtilase family 98 545 IPR000209 GO:0006508|GO:0008236
Stsc243314g00002 711 CDD PA_subtilisin_like 303 428 - -
Stsc243314g00002 711 Gene3D - 572 707 - -
Stsc243314g00002 711 CDD Peptidases_S8_3 73 533 IPR034197 -
Stsc243314g00002 711 Pfam Fibronectin type-III domain 606 704 IPR041469 -
Stsc243314g00002 711 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 101 111 IPR023827 -
Stsc243314g00002 711 Gene3D - 296 434 - -
Stsc243314g00002 711 Gene3D Peptidase S8/S53 domain 98 568 IPR036852 GO:0004252|GO:0006508
Stsc243314g00002 711 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 703 IPR045051 -
Stsc243314g00002 711 ProSiteProfiles Serine proteases, subtilase domain profile. 79 555 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243314g00002 Stsc-Chr243314 7028 11892 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243314g00002 1 531 Subtilisin-like Serine Gene Family AT5G03620 59.074 0.0 627
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243314g00002 - - adu:107476326 1003.82