Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243274g00001 ATGGAAGAAGCAGCACAAGTACCTGGATTGGAGCATCTTAATAAGGCTTTCGGTTGGGCTGCTAGGGATCCCTCTGAAATTGTGAATATTGCAACGATAATCTTGAGGAATGAGGATTATTGCGCCTCATATACTCTAACATACGGTGCAAAATCCAGTGATGAAAGCATCACATACGGAAGCTACTCTGATTCAATGGTTGTTGATGAACACTTTGTGGTTCAAATTCCTAATGGGTTGCCTCTTGATGCTGCTGCTCCTCTGCTAT 268 0.4291 MEEAAQVPGLEHLNKAFGWAARDPSEIVNIATIILRNEDYCASYTLTYGAKSSDESITYGSYSDSMVVDEHFVVQIPNGLPLDAAAPLL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243274g00001 89 SUPERFAMILY GroES-like 36 88 IPR011032 -
Stsc243274g00001 89 Gene3D - 37 89 - -
Stsc243274g00001 89 PANTHER ALDEHYDE REDUCTASE 37 89 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243274g00001 Stsc-Chr243274 9991 10803 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243274g00001 37 89 Monolignol Biosynthesis Gene Families AT4G37980 54.717 5.51e-16 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243274g00001 K23232 - var:108320064 90.1225