Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc243191g00002 ATGGCAGATTTTCTGACATCTACCCACCGTGCCAAGTGGATATTCACTCCTCAACAGTTGGTTGAAAAATATAGAGCTGCTAGTCATCGAGCCATACAAATTTTAGAGAAGTGTGGAGCAACTCTGATGGAAGTAGATAGTGATGGGACAATGTCATATCCTGAACCTCAGAATTGTGCGAAGGATAATGCTGAAAAGCATTCTCGATCAAAACCTCTCAGTATTGAAGAAGAACAATCTATAAAAGTGTTTTATGAAAACAAGCTACAAGAAGTTTGTAAAAATTTCCACTTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGGTTCTACCTGCAATGGTCAGTAATGGAACATCAGCCAAAACATATAATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAACCATGTCTCTGCTGAGGAGCTTGGTAAGGGAATCTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATCGTTTATGCACCATATCGCTCAGTTGAAGGTTTTATGACTGATATAGAGGACTTTTGCAATGCTAGAGATGACCAACTTCAAATGCTGAAG 615 0.3805 MADFLTSTHRAKWIFTPQQLVEKYRAASHRAIQILEKCGATLMEVDSDGTMSYPEPQNCAKDNAEKHSRSKPLSIEEEQSIKVFYENKLQEVCKNFHFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFMTDIEDFCNARDDQLQMLK 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc243191g00002 205 Gene3D - 13 198 - -
Stsc243191g00002 205 FunFam cyclin-H1-1 63 175 - -
Stsc243191g00002 205 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Stsc243191g00002 205 PIRSF Cyclin_C_H_G 57 203 - -
Stsc243191g00002 205 PIRSF Cyclin_C_H_G 1 39 - -
Stsc243191g00002 205 MobiDBLite consensus disorder prediction 53 72 - -
Stsc243191g00002 205 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Stsc243191g00002 205 PANTHER CYCLIN 60 192 IPR043198 GO:0006357|GO:0016538
Stsc243191g00002 205 Pfam Cyclin, N-terminal domain 88 174 IPR006671 -
Stsc243191g00002 205 SMART cyclin_7 87 168 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc243191g00002 Stsc-Chr243191 10271 13903 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc243191g00002 1 205 Core Cell Cycle Gene Families AT5G27620 66.341 2.45e-103 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc243191g00002 K06634 - gmx:547736 372.859